Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1903 ATGACCACATTTGCAGGAACAATTAGTTATACTGCACCAGAGATTGCTTTTACTATGAAAGCAAACGAGAAATGTGATGTGTATAGCTTTGGAGTGTTGACTTTAGAAATCATTATGGGAGGACATCCAGCAGAGCTTATTTCATCTTTGACAGATTATTCAGCCATTGACAATTTGTTGTTAAAGGATGTGTTGGACCTGCGGCTTTCTCCACTCACAAAACCCATTCTAGATGATGTGATCTTAGTTGCAAAAATAGCATTTTCTTGCTTGAATGAAACTCCTCAGTCTCGTCCAACCATGGAACATGTATCGACGGAGTTTGCAAGGACACCAAAATCTTATTCTGAGGACCAATTTCACACCATCACAATTGGACAAATTATGAGGGATTGA 396 0.3889 MTTFAGTISYTAPEIAFTMKANEKCDVYSFGVLTLEIIMGGHPAELISSLTDYSAIDNLLLKDVLDLRLSPLTKPILDDVILVAKIAFSCLNETPQSRPTMEHVSTEFARTPKSYSEDQFHTITIGQIMRD 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1903 131 Pfam Protein tyrosine and serine/threonine kinase 7 107 IPR001245 GO:0004672|GO:0006468
Mibi05g1903 131 SUPERFAMILY Protein kinase-like (PK-like) 1 108 IPR011009 -
Mibi05g1903 131 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1903 131 PANTHER LEUCINE RICH REPEAT KINASE 2 1 111 - -
Mibi05g1903 131 Gene3D Transferase(Phosphotransferase) domain 1 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1903 Mibi-ChrMibi05 24653579 24654061 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1903 2 121 Receptor kinase-like Gene Family AT4G31110 33.594 3.85e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi05g1903 PK_Tyr_Ser-Thr 2.5e-10 CL0016