Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1896 ATGACCTCATTTGCTGGTACCTATGGCTATGCTGCTCCAGAGATTGCTTTTACAATGCAAGCAAATGAGAAATGTGATGTTTACAGTTTTGGTGTTCTCACATTAGAAATTCTAATGGGAAGACATCCTGGAGATTTTATTTGTTCTTTGAATGAGATTCCAACATCCCATGATTTGCCGCTTAAGGATTTGTTGGATCAGCGAGTTGCTACACCCTTAAACCAAGTTTTTGAGGAAGTCATGTTGATTGCAAAAATAGCACTTGCCTGCTTGAATGAAGATCCTCAATACCGACCAACCATGGAACAAGTATCCTTGAATCTTCTGAGGTCTAAACCTTATACAATGAACCAGTTCACCAACATCACACTTGGGCAACTCATGAGAGCTTAA 393 0.3969 MTSFAGTYGYAAPEIAFTMQANEKCDVYSFGVLTLEILMGRHPGDFICSLNEIPTSHDLPLKDLLDQRVATPLNQVFEEVMLIAKIALACLNEDPQYRPTMEQVSLNLLRSKPYTMNQFTNITLGQLMRA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1896 130 PANTHER LEUCINE RICH REPEAT KINASE 2 1 113 - -
Mibi05g1896 130 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
Mibi05g1896 130 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1896 130 SUPERFAMILY Protein kinase-like (PK-like) 1 112 IPR011009 -
Mibi05g1896 130 Pfam Protein kinase domain 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1896 Mibi-ChrMibi05 24251202 24251686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1896 5 113 Receptor kinase-like Gene Family AT1G08590 35.345 8.25e-18 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi05g1896 PK_Tyr_Ser-Thr 1.3e-09 CL0016