Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1883 ATGAAGAACAATTCTCAGCAGAGAAGTGGCGTCCGGCAGTATCACAAATCCGAGCTTCCCCGGCTTCGGTGGACGCCGGAACTCCATCATCATTTTGTTGAAGCTGTTGGAACCCTTGGTGGTCAAGAAAAGGCAACACCGAAGAGAATTTTGCAGATGATGCGTGTGAAAGGATTGAAGATCTCCCACGTCAAAAGCCATCTTCAGATGTACAGAAACATGAAGGGGCATTCCATCATGTCACAAGTTCATAATCATCATCATCATCAATCACATAAAGGAAAAGCTCAAGCTCGTGCTAATGATCTTCATATCTGCTCCATTCACTTGCCCCAAAGATCGCCGGAAGCAAAAGTTTTAACGTCAAAATATAGAAATAGTGTGAAGGGAGAGTTGCATCTGTTAGATATCAAAGGGCTTTCTCAAAGCAGTGAAGAAATTTATTATGATCTCAATCAGGAGCCTTATACAATGGCGAGTACAGCAAATAGTGTGACAGCTCCATTTGGTGACTACTCGCCCTCTTTTGATCACACACATCTGCTTCCAGTTAATATCATGAACAGTGTGCAACACGAAGACGAAGACGATGATAACGACGATGAAGAGGACCAAGTCATTAATGATTCTACAAATTCTACACAGTCTATTGGAGGGAATTACATAAACTTAGACCTAACTATTTGA 687 0.4192 MKNNSQQRSGVRQYHKSELPRLRWTPELHHHFVEAVGTLGGQEKATPKRILQMMRVKGLKISHVKSHLQMYRNMKGHSIMSQVHNHHHHQSHKGKAQARANDLHICSIHLPQRSPEAKVLTSKYRNSVKGELHLLDIKGLSQSSEEIYYDLNQEPYTMASTANSVTAPFGDYSPSFDHTHLLPVNIMNSVQHEDEDDDNDDEEDQVINDSTNSTQSIGGNYINLDLTI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1883 228 FunFam Myb family transcription factor 18 76 - -
Mibi05g1883 228 MobiDBLite consensus disorder prediction 193 207 - -
Mibi05g1883 228 MobiDBLite consensus disorder prediction 192 214 - -
Mibi05g1883 228 SUPERFAMILY Homeodomain-like 20 73 IPR009057 -
Mibi05g1883 228 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 74 IPR006447 GO:0003677
Mibi05g1883 228 Gene3D - 19 76 - -
Mibi05g1883 228 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 100 - -
Mibi05g1883 228 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
Mibi05g1883 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1883 Mibi-ChrMibi05 23911973 23917661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1883 10 75 G2-like Transcription Factor Family AT1G14600 69.697 8.15e-26 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi05g1883 Myb_DNA-binding 1.6e-06 CL0123