Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1881 ATGTCGCCGTCTTTGGTTTCCGTTTTTCTCCTTTATTTGCTTGTTATAGTTGCAGCTGAGGAAGCAATCTGGGTGAGTTTTTCGTCATCATCATCATCATCCATGCTTCATTTTCTGTTTGCTAGATTTTCTGTCTCTCCAAAACGGAAGAGGACACCCCATTTAGGGTTTCTCCTTCGCAATGCTTCTCACATTTTCAATTCCTTCACTTCAGTAGTGCAATCATCTGAATCTGCTTTATCCAAGCAAAAACAAGAGCTACATGAATCGTCCAAAAGGGTTAATTTGAAAGGCATAGATAAATCCCATTCCGTTTTTGATATTTTCAGGAGTTATGGATTATCAGATACCCAGATTTCCAAAGCAATAAGAACATACCCACCACTGCTTCGGATGAAACTGAAAATCCTTCTTCCCAAACTTAGATTTCTCGATTCTTTTGTTTTATCTAGGTCTGAACTCCAAGAAATTCTCACTTCTAGTTCTGTGATCTTACGCGGCAATCTAGAGAAAAATTTGATCCCCCGTATGGAGATCCTTAAGACTGTTCTTGATAATGATCATGAGAAACTGTTGCTGGCTTTAGGACGCGGCACGTGGATTTTTTACCGACAGGGTGTGGGTAATGTAGTTCCAAACATGAAGGTTTTGAGAGAACTTGGAGTTCCCAACTCTTCTGTCACTCAACTTTTGATTAATCATTTTGGTGTTGCCTTTATAAAGCCTGCAAAATTAGCTGAGCATGTCAAGTTTGCCATAAAAATAGGGATTGAACCAGATAGGCCAACGTTCGTTCGGGCAATTTATGTGTTATCATCTATGAAGAAATCAACTTGGAAGTCAAAGCTTGATGCATTTGAGAGGTTGGGCTGGTCCAAGGAAATGACTATTTCTGTTTTCAGGAAGTATCCTACGTGTATGTTGATTTCAGAGGACAAAATTGCAAACTCAATTAAGTTTTTTGTGGGTGAAATGGGTTTGACAAGTGAAGACATAGCAACATGCCCATCGCTTCTTGGCTCTAGCTTGAATCAAAGGATTGTTCCCAGATGGTCTGTAGTTAAAACTTTGAAAATGAATGGTTTGTTAAAGAAAAATCCGGCACCGAGGACCATTTTTGCAGAGAGTGAGAAAGAGTTTCTAGAGAAATTTGTGAACAGATTTCAGGGAAGTTGTCCCCAGCTTTTGAACATTTATAAAGGTTCAAAAGCATCACTGGCTGAAGTTCCGTGA 1233 0.3942 MSPSLVSVFLLYLLVIVAAEEAIWVSFSSSSSSSMLHFLFARFSVSPKRKRTPHLGFLLRNASHIFNSFTSVVQSSESALSKQKQELHESSKRVNLKGIDKSHSVFDIFRSYGLSDTQISKAIRTYPPLLRMKLKILLPKLRFLDSFVLSRSELQEILTSSSVILRGNLEKNLIPRMEILKTVLDNDHEKLLLALGRGTWIFYRQGVGNVVPNMKVLRELGVPNSSVTQLLINHFGVAFIKPAKLAEHVKFAIKIGIEPDRPTFVRAIYVLSSMKKSTWKSKLDAFERLGWSKEMTISVFRKYPTCMLISEDKIANSIKFFVGEMGLTSEDIATCPSLLGSSLNQRIVPRWSVVKTLKMNGLLKKNPAPRTIFAESEKEFLEKFVNRFQGSCPQLLNIYKGSKASLAEVP 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1881 410 FunFam Mitochondrial transcription termination factor-like 171 392 - -
Mibi05g1881 410 SMART mt_12 329 360 IPR003690 GO:0003690|GO:0006355
Mibi05g1881 410 SMART mt_12 120 150 IPR003690 GO:0003690|GO:0006355
Mibi05g1881 410 SMART mt_12 262 292 IPR003690 GO:0003690|GO:0006355
Mibi05g1881 410 SMART mt_12 155 187 IPR003690 GO:0003690|GO:0006355
Mibi05g1881 410 SMART mt_12 297 328 IPR003690 GO:0003690|GO:0006355
Mibi05g1881 410 SMART mt_12 192 223 IPR003690 GO:0003690|GO:0006355
Mibi05g1881 410 Gene3D Transcription termination factor 3, mitochondrial 187 390 IPR038538 -
Mibi05g1881 410 PANTHER CGI-12 PROTEIN-RELATED 57 387 IPR003690 GO:0003690|GO:0006355
Mibi05g1881 410 Pfam mTERF 244 381 IPR003690 GO:0003690|GO:0006355
Mibi05g1881 410 Pfam mTERF 107 258 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1881 Mibi-ChrMibi05 23902204 23903513 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mibi05g1881 mTERF 5.2e-17 No_clan