Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1880 ATGTTTAATTTTCTGATTGCAAGATTATTTGTGTCACAACCATGTCGTCAGAGGAGAAAAACCCATCTGGGTTTTCTCTATCGCAATGCATCCCACATTTTCAGTTCCTTTTCTTCGGTTGTGGTATCATCGAAATCTGCTAAACGACATGAATCGTTCACTGTTTCTTTTCTCATGAACTCATGTGGTTTGTCCCCAAAATTAGCTGTTCAAGTGTCCAAAAAGATTAATTTGAAAAACCCAGATAATCCCACCATTGTACTTAACATATTTAGGAGCTATGGATTCTCAAATTCTCAGATATCTAAGATTGTGATAAAGCATCCATCTGTGCTTTTGACTCATGAGAATATCATTTTGCCTAAGCTAAGGTTTTTTGAGTCTATAGGGTTGTCAAGGTCTGAACTCCCAGAGGTCCTCATTTCTAACATTAGATTGTTAGTGTGGAGCCTACAGAATCGAATAATCCCCGGTTATGAGGGCCTAAAGAGTGTGATTGGTGATGATCATGAAATGCGTACAATAATTAGCAAACGCAGAGGATGGCGTTTTCTGCACTATGATGTGAAGAATTTGGTCCCAAACATAAAGTTTTTGAGAGAGGTTGGAGTGCCTAATTCTTCTCTCAACCTGATCCTAAATAGGTTCACCAGTGCAGCTTTAGTGGATCATGCAAAGTTTGTTGAACATGTGAAGTTTTCTGAAGAATTAGGAATTAAACCCATTAGGGTTACATTCATACACTCTATTAATGTGCTATCAATGGCGAAGAAATCAACTTGGGAGTTGAAGCTGGACGTCTATGAGAGGTGTGGCTGGTCCAGGGATGAGACCCTTTCAGCATTCAAGAAGTTTCCATATTGTATGTTAACATCAGAGGAGAAAATCACGAGCACAATTAAGTTTCTTGCGGATGAACTGGGTTTGTCATCAAAAGATATAGTTAGATCCCCAGCATATCTTGGTTATAACTTGAAGCAGAGGATTATTCCTAGATCCTCAGTTTTTAAAGTTTTGAGAATGAAGGGTTTGCTCGATAATGATACGCCCTTCTTTTCCTTGGTCAGAGTAAGTGAGACAATGTTCCTGGACAAGTTTGTTTTCAGATTTCAAGAAAGTGTTCCTGAGCTGTTGAACATTTATCAAGATCAGCTAACACATTCACCTCAGTCTTCAAGTGTATGA 1185 0.3865 MFNFLIARLFVSQPCRQRRKTHLGFLYRNASHIFSSFSSVVVSSKSAKRHESFTVSFLMNSCGLSPKLAVQVSKKINLKNPDNPTIVLNIFRSYGFSNSQISKIVIKHPSVLLTHENIILPKLRFFESIGLSRSELPEVLISNIRLLVWSLQNRIIPGYEGLKSVIGDDHEMRTIISKRRGWRFLHYDVKNLVPNIKFLREVGVPNSSLNLILNRFTSAALVDHAKFVEHVKFSEELGIKPIRVTFIHSINVLSMAKKSTWELKLDVYERCGWSRDETLSAFKKFPYCMLTSEEKITSTIKFLADELGLSSKDIVRSPAYLGYNLKQRIIPRSSVFKVLRMKGLLDNDTPFFSLVRVSETMFLDKFVFRFQESVPELLNIYQDQLTHSPQSSSV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1880 394 FunFam Mitochondrial transcription termination factor-like 151 374 - -
Mibi05g1880 394 Pfam mTERF 258 362 IPR003690 GO:0003690|GO:0006355
Mibi05g1880 394 Pfam mTERF 88 241 IPR003690 GO:0003690|GO:0006355
Mibi05g1880 394 SMART mt_12 311 345 IPR003690 GO:0003690|GO:0006355
Mibi05g1880 394 SMART mt_12 31 65 IPR003690 GO:0003690|GO:0006355
Mibi05g1880 394 SMART mt_12 102 132 IPR003690 GO:0003690|GO:0006355
Mibi05g1880 394 SMART mt_12 279 310 IPR003690 GO:0003690|GO:0006355
Mibi05g1880 394 SMART mt_12 173 205 IPR003690 GO:0003690|GO:0006355
Mibi05g1880 394 Gene3D Transcription termination factor 3, mitochondrial 162 373 IPR038538 -
Mibi05g1880 394 PANTHER CGI-12 PROTEIN-RELATED 50 368 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1880 Mibi-ChrMibi05 23896892 23898076 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mibi05g1880 mTERF 1.5e-14 No_clan