Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1879 ATGAACTCATTGGGCATGTCCCCTGAAGCTGCTGGTAGAGTATCTAAAAGGGTTGAACTGAAAGACCCAGGTAAAGCTGATTCAGTACTTAATCTTTTTAGAAGATATGAATTATCAGATGCACAGATATCCAAAATTGTGAAATGGTTTCCTGGGGTGTTAGTGGCAAATTTGGAGCATAATCTTCTCCCCAAGCTAAGGTTTTTTCAGTCTATTGGGTTTTCAGCTGCTGAACTTTTCTCCTGTAACCCTGCATTTCTCGCATGTAGTTTAGAGAAACGTATGATTCCCCTGTATGAGGCTCTTAAAAGTGTGCTTGATGATGATGGGAAAGTAAAGAAATGCCTAAAATGCCCTTCTTGGAGATTTAGCTCCTATGATGTAGAGAATATATTTCCAAACATAAAGGTTTTGAGAGATGAAGGAGTGCCTCAATCTTCTGTAATCACACTGTTATCTAGACAGGCCGATGTAGCATTTATGAATCAAACAAAGTTTATTGAATATGTTAAGTTAGTCAGGGAAACCGGAACGGATCCTTCCAAGCATGCGTTTGTTGAAGCACTTTTAATTGCAACAAAGTTGAGTAAATCAACCTGGGAGTTTAAACTGGATGTCTTTGAGAGACTCGGCTGGTCCAGGGATGTCACTCTTTTGGCATTCCGTAAGTTTCCAAATATCATGATGATATCAGAGAAAAAAATCACAGACTCAATGAAATTTTTTGTGGATGAAATGGGTTTACAGTTGGAAGATATAGCAGGATGCCCCACTCTTCTTAGCTATAGCTTGAAGCAGAGGATTGTTCCTAGATGGTCCGTAGTTAAGATTTTGAAAATGAAGGGTTTAATGAAGGAAATTTTTTCCCTGAAATCTGTTATTATAATGAGTGAGAAAAAGTTTCTGGAAGAATTTGTCATCAAATTTCAACAAAATGTTCCTCAGCTACTGAAAATCTATAAAGGTGAACTGAAATTCTTACCTGAAGTTGGGGCATAG 999 0.3784 MNSLGMSPEAAGRVSKRVELKDPGKADSVLNLFRRYELSDAQISKIVKWFPGVLVANLEHNLLPKLRFFQSIGFSAAELFSCNPAFLACSLEKRMIPLYEALKSVLDDDGKVKKCLKCPSWRFSSYDVENIFPNIKVLRDEGVPQSSVITLLSRQADVAFMNQTKFIEYVKLVRETGTDPSKHAFVEALLIATKLSKSTWEFKLDVFERLGWSRDVTLLAFRKFPNIMMISEKKITDSMKFFVDEMGLQLEDIAGCPTLLSYSLKQRIVPRWSVVKILKMKGLMKEIFSLKSVIIMSEKKFLEEFVIKFQQNVPQLLKIYKGELKFLPEVGA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1879 332 FunFam Mitochondrial transcription termination factor-like 95 313 - -
Mibi05g1879 332 SMART mt_12 218 249 IPR003690 GO:0003690|GO:0006355
Mibi05g1879 332 SMART mt_12 250 281 IPR003690 GO:0003690|GO:0006355
Mibi05g1879 332 SMART mt_12 44 75 IPR003690 GO:0003690|GO:0006355
Mibi05g1879 332 SMART mt_12 77 109 IPR003690 GO:0003690|GO:0006355
Mibi05g1879 332 Gene3D Transcription termination factor 3, mitochondrial 4 118 IPR038538 -
Mibi05g1879 332 Gene3D Transcription termination factor 3, mitochondrial 119 313 IPR038538 -
Mibi05g1879 332 Pfam mTERF 30 236 IPR003690 GO:0003690|GO:0006355
Mibi05g1879 332 Pfam mTERF 195 302 IPR003690 GO:0003690|GO:0006355
Mibi05g1879 332 PANTHER CGI-12 PROTEIN-RELATED 2 307 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1879 Mibi-ChrMibi05 23886145 23887143 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mibi05g1879 mTERF 1e-23 No_clan