Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1878 ATGCTTAATTTCCTGATTTCAAGATTATCTTCTTCACTGCCTTCCTGTAGGAAAACCCAGTTAGGGTTTCTTCCTCAAAATGCATCCTTTATTGCCTATTCTTTTTCTGCGGTTGCGAAATTATCTCAATCAAATAAAGATGGGGAATTTCCTTTTACTGTTTCTTATCTCATGAACAAACTTGACATGTCTGCCGAAGTTGCTTATAGAGTGTCCAAAAGGGTTGAACTGAAAACCCCAGACAAACCGGACTCCTCGGTTAAATTTCTCAGAAGCCATGGATTCTCAGAAACCCAGATTTCCAGAATTGTGAAATTCTTTCCCCAAGTGCTTCTAGCAAATCCTGAGAAGACTCTTTTGCCCAAACTAAGGTTTATGCATTCTATTGGATTTTCAGATTCTGAACTCACAGAACTATTCTCTGGTAACCCTGCATTACTAGTTTTAAGCTTAGAGAAACGTATAATTCCATACTATGAGGCCCTCAGAAAGCTAGTTTCTGATGAATGCAAGGTAAAGAGGGGTTTGACAAGGTCAAGGTTGAATGTTTGCTGCTATGGGTCAATGAACATATTTCCAAACATAAAGGTTTTGAGAGATGAAGGAGTGCCTCAATCTTCTATCGTGAACCTGTTGTGTAAAGATCCAAATGTAGCATTTATCAATCAATTGAAGTTCGTTGAATGTGTTAAGTTTGTCAAGGAAACAGGAATTCAACGTTTCAAGGTTACGTTTATTGATGCACTTATTGTTGTAATAAGGGTCGGTAAATCAAAATGGGAATCGAGACTGGTAAACTTTGAGAGGTTTGGCTGGTCCAGGGATGTCACTCTTTCGGCATTCAGCAAGTTTCCAAATATCATGTGTTGCTCTGAGGAAAAAATCACAAACACGATGAAGTTTTGTTTGGATGAAATCGGTTTACAGTTGGTAGATATAGCTGATTGCCCTACAATTTTTAGCTATAGTTTGAAACAGAGGATTATTCCTAGATGGTCAGTAGCTAAAATTTTGAAAATGAAGGGTTTAATCAAGGCTGATATGTCCATACCTTACCTGTTGATTATGAGTGAGAAAAACTTTCGGGAAAATTTTGTGATCAAATTTCAAGAACGTGTTCCTCAGCTACAGGAACTCTATAGGGGTGAATTGAGACCTGTATCTGAAGTTCTGGCATAG 1179 0.38 MLNFLISRLSSSLPSCRKTQLGFLPQNASFIAYSFSAVAKLSQSNKDGEFPFTVSYLMNKLDMSAEVAYRVSKRVELKTPDKPDSSVKFLRSHGFSETQISRIVKFFPQVLLANPEKTLLPKLRFMHSIGFSDSELTELFSGNPALLVLSLEKRIIPYYEALRKLVSDECKVKRGLTRSRLNVCCYGSMNIFPNIKVLRDEGVPQSSIVNLLCKDPNVAFINQLKFVECVKFVKETGIQRFKVTFIDALIVVIRVGKSKWESRLVNFERFGWSRDVTLSAFSKFPNIMCCSEEKITNTMKFCLDEIGLQLVDIADCPTIFSYSLKQRIIPRWSVAKILKMKGLIKADMSIPYLLIMSEKNFRENFVIKFQERVPQLQELYRGELRPVSEVLA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1878 392 PANTHER CGI-12 PROTEIN-RELATED 52 368 IPR003690 GO:0003690|GO:0006355
Mibi05g1878 392 FunFam Mitochondrial transcription termination factor-like 151 373 - -
Mibi05g1878 392 Gene3D Transcription termination factor 3, mitochondrial 168 372 IPR038538 -
Mibi05g1878 392 Pfam mTERF 87 244 IPR003690 GO:0003690|GO:0006355
Mibi05g1878 392 Pfam mTERF 252 361 IPR003690 GO:0003690|GO:0006355
Mibi05g1878 392 SMART mt_12 209 239 IPR003690 GO:0003690|GO:0006355
Mibi05g1878 392 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Mibi05g1878 392 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Mibi05g1878 392 SMART mt_12 310 341 IPR003690 GO:0003690|GO:0006355
Mibi05g1878 392 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1878 Mibi-ChrMibi05 23875552 23876730 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mibi05g1878 mTERF 1.6e-23 No_clan