Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1874 ATGAACTCATGTGGTATGTCCGCCAAAGATGCTAGTTTAGCATCGAAAAGGATTGAACTGAATGACCCAGATAAACCCAACTCGGTGCTTAATCTTCTTAGGAGTTACGGATTCTCTGATACACATATATACAAGGTTGTTCAAAGGTTTCCCCAAATGCTTTTGCTAAGTCCTGAGCATAACCTCTTGCCCAAGCTAAGATTTATGCAGTCTATAGGGTTTTCAGCTTCTGAAATCCCTGAATTTTTCTGTTATAACTCCCAATTGATAACGTCAAGCTTAGAGAAACGTATAATTCCCCACTATAAGGCCCTTAAAAGTGTGATTGATGATGATGGACAAGTAAGGAAATGTCTAAAAGGCTCTGTTTGGTCTGTTTGCTCCTATGGTGTGACAAATATGGTCCCAAACATAAAGGTCTTGAGAGATGAAGGAGTGCCTCAATCTTCGGTCTTCTATCTGTTAGACAGACGGGCGAATGTAGCGTTTATGGATCAATCGATGTTTGGTGAATATGTCAAGCTTGTCAAGGATAAAGGGATTGAACCTTTCAAGACTGCATTTGTTGATGCACTTATAGTTCTGACACAGTTGAGTAAATCAACCTGGGAGTTGAAACTAGAGACCTATGAGAGTTCAGGCTGGTCCAGGGATGTCGTTCTTTCGGCTTTTTGTAAGGTTCCAATGATCATGGCCTTGTCAGAGAAGAAAATCAGAGACACAATGAAGTTTTTTACTGATGAAATGGGTTTGCAGTTGGAAAAGATAGCTGGACGTCCGAATATTCTAAGATATAGCTTGAAGAGGAGGATTGTTCCTAGATGGTCTGTAGTTAAAATATTGAAAATGAAGGGCTTAATCAAGGATGATATATCCCCATTTTATATCATTGCTATGGGTGAGAAAAATTTTCTGGAAAATTTTGTGATTAAATTTCAGGAAATCGTTCCTCAGCTTCCCAAACTCTATAGAGGTGAATTGAGACCTTTACCTGAAGTTCAGGAAATCGTTCCTCAGCTTCCCAAACTCTATAGAGGTGAATTGAGACCTTTACCTGAAGTTCAGAAAATTATGTCCAAGCATCACTGGTTTTCAAAATCCTCACTGAAGGACCTGAGTGGCTTGGAAAACCTGAGTCACTTCTCAGACTATCTCAATTACAAGAGTAATAAAGTTACTGAGGGAGTGGAAACTGAAGATGGCAATTTGCTATCACATTGA 1221 0.3939 MNSCGMSAKDASLASKRIELNDPDKPNSVLNLLRSYGFSDTHIYKVVQRFPQMLLLSPEHNLLPKLRFMQSIGFSASEIPEFFCYNSQLITSSLEKRIIPHYKALKSVIDDDGQVRKCLKGSVWSVCSYGVTNMVPNIKVLRDEGVPQSSVFYLLDRRANVAFMDQSMFGEYVKLVKDKGIEPFKTAFVDALIVLTQLSKSTWELKLETYESSGWSRDVVLSAFCKVPMIMALSEKKIRDTMKFFTDEMGLQLEKIAGRPNILRYSLKRRIVPRWSVVKILKMKGLIKDDISPFYIIAMGEKNFLENFVIKFQEIVPQLPKLYRGELRPLPEVQEIVPQLPKLYRGELRPLPEVQKIMSKHHWFSKSSLKDLSGLENLSHFSDYLNYKSNKVTEGVETEDGNLLSH 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1874 406 FunFam Mitochondrial transcription termination factor-like 94 316 - -
Mibi05g1874 406 Pfam mTERF 197 304 IPR003690 GO:0003690|GO:0006355
Mibi05g1874 406 Pfam mTERF 30 246 IPR003690 GO:0003690|GO:0006355
Mibi05g1874 406 PANTHER CGI-12 PROTEIN-RELATED 2 311 IPR003690 GO:0003690|GO:0006355
Mibi05g1874 406 Gene3D Transcription termination factor 3, mitochondrial 114 315 IPR038538 -
Mibi05g1874 406 SMART mt_12 253 284 IPR003690 GO:0003690|GO:0006355
Mibi05g1874 406 SMART mt_12 80 112 IPR003690 GO:0003690|GO:0006355
Mibi05g1874 406 SMART mt_12 221 252 IPR003690 GO:0003690|GO:0006355
Mibi05g1874 406 SMART mt_12 44 75 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1874 Mibi-ChrMibi05 23828507 23830499 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mibi05g1874 mTERF 1.5e-26 No_clan