Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1866 ATGGAGGATGGAAGTAAGAAGGAGATGAATAACAAGAACATGATGATGACGATGAGGTCATCAGAAGATGAAGATGAAAAAGAAGAGGATGATGATGATGATCAGAAAGGAATGCTTCCAGGGTTTAGATTCCATCCAACAGATGAAGAACTTGTAGGGTTTTATCTCACAAGGAAGGTTCACAAGAAAACCCTTCGAATCGAACTCATCAAACATATTGATATCTACAAATATGATCCCTGGGATCTTCCAAAGGCGAGTGGGAGCTTGGGGGAGAAGGAATGGTATTTTTTCTGCAAGAGAGGGAGGAAGTATAGGAATAGCATCAGGCCAAACAGGGTGACTGAGTCAGGTTTCTGGAAGGCAACTGGAATTGACAAGTCCATTTACAATAATGCCCTCACCCACTGCATTGGCCTCAAGAAGTCCCTCGTTTATTACAAGGGTAGTGCTGGTAAAGGCACCAAAACTGATTGGATGATGCATGAATTTCGCCTCCCTCCTAATAATCCTACCACCAATCATCTTCAAGAAGCTGAAGTGTGGACCCTTTGCAGAATATTCAAAAGAATCCCAACGTACAGAAAATACACACCAACTTCCAAAGATACAACAAAAGCAACAGCAACAACAATAGATTCAAACAACTCCAAAACATTAGAATTCGACAAATACAACAATAAGCCTTATAACTCAACCTGTTTCCAATCAACATCATCCTCATCAGATTCTATTAATTATCATTTTGAAAGAAAATTACCAGTTGTTAATGATGAAAGAAGCCACTTTTTTCTTGGTCAGTTCGCTGCAACCCATCATGAAGCTCCTCCATCAATGGTGACTAATAGCTATTATAACCATAGCTTTTTGAATCATCATCATAGCAATGTGGAAGATGTTCTTGCTAATGGTAATTGGGATGAACTCAGATCTGTCGTTCAGTTTGCTGCTGATCATGATTCCACTGTCCTATGA 975 0.3969 MEDGSKKEMNNKNMMMTMRSSEDEDEKEEDDDDDQKGMLPGFRFHPTDEELVGFYLTRKVHKKTLRIELIKHIDIYKYDPWDLPKASGSLGEKEWYFFCKRGRKYRNSIRPNRVTESGFWKATGIDKSIYNNALTHCIGLKKSLVYYKGSAGKGTKTDWMMHEFRLPPNNPTTNHLQEAEVWTLCRIFKRIPTYRKYTPTSKDTTKATATTIDSNNSKTLEFDKYNNKPYNSTCFQSTSSSSDSINYHFERKLPVVNDERSHFFLGQFAATHHEAPPSMVTNSYYNHSFLNHHHSNVEDVLANGNWDELRSVVQFAADHDSTVL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1866 324 Pfam No apical meristem (NAM) protein 40 166 IPR003441 GO:0003677|GO:0006355
Mibi05g1866 324 MobiDBLite consensus disorder prediction 1 40 - -
Mibi05g1866 324 FunFam NAC domain-containing protein 35 47 193 - -
Mibi05g1866 324 Gene3D NAC domain 47 193 IPR036093 GO:0003677|GO:0006355
Mibi05g1866 324 SUPERFAMILY NAC domain 36 189 IPR036093 GO:0003677|GO:0006355
Mibi05g1866 324 ProSiteProfiles NAC domain profile. 38 190 IPR003441 GO:0003677|GO:0006355
Mibi05g1866 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 36 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1866 Mibi-ChrMibi05 23685204 23690518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1866 14 190 NAC Transcription Factor Family AT5G39820 55.330 6.78e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi05g1866 NAM 1.3e-35 No_clan