Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1855 ATGGCGAATGAGAAAGATCATTACTACGATCAGTATGATCTGAACAATTTCTATAATAATTACAACAACCACCATGATCATCATCACCAGAACCTAGTTCATCAACAAGGGTTTGATCATCATAATAATAATACAGGAGGGAGCTTCACAGATTGCTTGAATGGAGGGTTTATGGATTATAATGTTCTGTCAAGGGCCTTTGACTTGTCTTGTTCATCAGCTTCTGAAGTGATCTCTTCCTCCATTAATGATCCATACAAGCCTTCACCATCAGCTGCTGAATTAACTAGTCCTACCACCACCACTACTGTGGGAGATTCTCAAGTAGCAGCTGCGCAACTCAATTCCTCTGTGTCCAATTCATCTTCTATTAATGAAGCTGAAGAAGCAGTTGTTACTGAAGAAGACTCAGCCAAAAGCTTCAACAAAGACAAACACCAAGATGCAGACCAAATGTCCAAGAAAGAGAACAAGGGGAAAGGGAATAATAAGAAAGAGAAAAAGGCAAGAGAACCGCGTTTTGCGTTCTTGACAAAAAGTGAGGTTGATCACTTGGAAGATGGCTACAGATGGAGAAAATATGGGCAGAAAGCCGTCAAAAACAGTCCTTACCCAAGGAGTTATTATAGATGCACAAGTCAAAAGTGCAATGTGAAGAAGAGAGTGGAGAGGTCATTCCAGGATCCATCAATTGTGGTCACAACATATGAAGGACAACACAACCACCATTGTCCGGCCACACTCCGTGGCAGTGCCAACGCCGCCCTGATGCTATCGTCGGCCACGGCGGCCGTCTCCCCGGCTTCTCTTTACGGTACTTCATCGCCGTTGGCGAGGACAGCCATGTTTCCCCAAGAACTTCTTGCTCAGTTTCTCCCAAGTTATCAAGGTGATGATCATCATCTTCATCTTCATAATCATCACCAAAACCATCCCATGTTCCATCAAAACCCTAATAATAATACTCATCATCATCATCATCACCACCTTCAAGTCCCACATGACCATGGCTTGTTGCAAGACTTGTTACCTCCTTCTTCTTCATCCTTCCCTAGTAGACAACAAGAGCCATGA 1074 0.4339 MANEKDHYYDQYDLNNFYNNYNNHHDHHHQNLVHQQGFDHHNNNTGGSFTDCLNGGFMDYNVLSRAFDLSCSSASEVISSSINDPYKPSPSAAELTSPTTTTTVGDSQVAAAQLNSSVSNSSSINEAEEAVVTEEDSAKSFNKDKHQDADQMSKKENKGKGNNKKEKKAREPRFAFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCNVKKRVERSFQDPSIVVTTYEGQHNHHCPATLRGSANAALMLSSATAAVSPASLYGTSSPLARTAMFPQELLAQFLPSYQGDDHHLHLHNHHQNHPMFHQNPNNNTHHHHHHHLQVPHDHGLLQDLLPPSSSSFPSRQQEP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1855 357 SUPERFAMILY WRKY DNA-binding domain 178 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g1855 357 MobiDBLite consensus disorder prediction 300 357 - -
Mibi05g1855 357 Gene3D WRKY domain 170 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g1855 357 SMART WRKY_cls 185 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g1855 357 Pfam WRKY DNA -binding domain 186 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g1855 357 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 317 IPR044810 GO:0003700
Mibi05g1855 357 MobiDBLite consensus disorder prediction 79 172 - -
Mibi05g1855 357 MobiDBLite consensus disorder prediction 79 128 - -
Mibi05g1855 357 FunFam WRKY transcription factor 57 171 245 - -
Mibi05g1855 357 MobiDBLite consensus disorder prediction 342 357 - -
Mibi05g1855 357 MobiDBLite consensus disorder prediction 132 172 - -
Mibi05g1855 357 ProSiteProfiles WRKY domain profile. 180 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g1855 357 Coils Coil 124 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1855 Mibi-ChrMibi05 23511985 23513980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1855 29 250 WRKY Transcription Factor Family AT4G18170 49.787 4.54e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi05g1855 WRKY 1.3e-25 CL0274