Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1854 ATGTCTTCCAATAGTTCTTTGAATGTGCAGCTGTCTAAGAAGACGACGTTTTTGGGTTTGAAACTATGGGTCTTAATTGGGATAGGTGTGGGTGCATTTATAGTCCTCATTCTTTGTATATTATCTATATGGGTGATGTTTTGGAGAAAGTCAAAGAGACCGCCGAACAAATATGCTACATTACAAATACCAAATGTGTCGAAAGAGATCAAGGTCGATAAAGTTGGAGCGCATAGTTCTTATAATCACTCAGAAAGTGTTTATGTTCACTTTCATGAGAAGGCAAGTGATAAGAATACAGATAAGATGTTAGTTAAGTCAGGCATGAGCAAATCCAGTGATCCGGACAATATCAGTCAGTGCAGTTCTATATATCACCATGAGAGAGGAGGTAGTTCAATGTCGGGTGAGGATGGGAGCTCCGGGGCCTTCAAGAAGCAATCTGTATTATCATATGGTGGAATGGTGACCGCCTCTCCTTTGATTGGTTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACGCTCAGGGATCTTGAACTTGCAACAAATCGATTTTCAGCGGAAAATGTGATTGGTGAGGGTGGATATGGGGTTGTTTACAGGGGAATGTTGATCAATGGAACTGAGGTGGCTGTGAAGAAAATTCTTAATAACTTGGGACAAGCAGAAAAAGAGTTCAGGGTCGAAGTGGAGGCTATAGGCCATGTTCGACATAAGAATCTTGTACGCCTACTTGGATATTGCATTGAAGGAGTTCATAGGATGCTTGTGTATGAGTATGTGAATAACGGTAACTTAGAGCAATGGTTACATGGGGGCATGCGCCAACACGGGACACTTACTTGGGAGGCCCGCATGAAAGTCATAACTGGCACAGCCAAAGCGCTTTCATACTTGCATGAAGGAATAGAACCGAAAGTTGTTCACCGTGACATAAAGTCTAGCAACATATTAATTGATGATGAGTTCAATGCAAAGGTTTCTGACTTCGGCCTGGCCAAACTCTTGGATTCAGGAGAAAGTCACATAACAACTAGAGTCATGGGAACATTCGGTTATGTGGCACCCGAGTATGCTAATACTGGTTTGTTAAACGAGAAGAGCGATGTTTACAGCTTCGGTGTTCTACTTCTTGAAGCAGTTACTGGAAGGGACCCGGTAGACTATGCACGTCCTGCTAATGAGGTTAATCTTGTTGAATGGCTCAAGATAATGGTCAGTGCTAGAAGAGCCGAGGAAGTCGTAGACCCAAGCCTTGAAGTCAAACCATCGACACGAGAATTAAAACGTGCCCTTCTAGTTGCGCTTAGGTGTCTTGATCCTGCTGCAGAAAAGAGGCCCAAAATGAGTCAGGTTGTGAGGATGTTTGAAGCTGACGAAAATCCATTCCGAGAGGACCGAAGGAACCGCAAAGGTCACACTGCCAGTATGGAAATTGAAACCACAAAGGATCTTTCTGGTGGGCCCAATGCTGAGTCTGAAATCCATAAGCTAGAGGCAACTCAGAGAGTATGA 1524 0.437 MSSNSSLNVQLSKKTTFLGLKLWVLIGIGVGAFIVLILCILSIWVMFWRKSKRPPNKYATLQIPNVSKEIKVDKVGAHSSYNHSESVYVHFHEKASDKNTDKMLVKSGMSKSSDPDNISQCSSIYHHERGGSSMSGEDGSSGAFKKQSVLSYGGMVTASPLIGLPEFSHLGWGHWFTLRDLELATNRFSAENVIGEGGYGVVYRGMLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGGMRQHGTLTWEARMKVITGTAKALSYLHEGIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKIMVSARRAEEVVDPSLEVKPSTRELKRALLVALRCLDPAAEKRPKMSQVVRMFEADENPFREDRRNRKGHTASMEIETTKDLSGGPNAESEIHKLEATQRV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1854 507 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1854 507 MobiDBLite consensus disorder prediction 466 507 - -
Mibi05g1854 507 Gene3D Transferase(Phosphotransferase) domain 1 264 476 - -
Mibi05g1854 507 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Mibi05g1854 507 FunFam Putative receptor-like serine/threonine-protein kinase 264 474 - -
Mibi05g1854 507 PANTHER OS01G0323000 PROTEIN 1 483 - -
Mibi05g1854 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Mibi05g1854 507 Gene3D Phosphorylase Kinase; domain 1 170 263 - -
Mibi05g1854 507 SUPERFAMILY Protein kinase-like (PK-like) 172 461 IPR011009 -
Mibi05g1854 507 FunFam Putative receptor-like protein kinase 170 263 - -
Mibi05g1854 507 Coils Coil 208 228 - -
Mibi05g1854 507 ProSiteProfiles Protein kinase domain profile. 188 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1854 507 Pfam Protein kinase domain 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1854 507 CDD STKc_IRAK 194 460 - -
Mibi05g1854 507 MobiDBLite consensus disorder prediction 466 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1854 Mibi-ChrMibi05 23494458 23497723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1854 165 462 Trihelix Transcription Factor Family AT1G70460 48.515 6.09e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mibi05g1854 Pkinase 8.7e-49 CL0016