Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1852 ATGGATGAAACCCTTCTCTCCAAGAAACGAGGGACGGTCGCAGAATCATCAAGCAGGCCACCATCCTTAACATCAAGCAGGCCACCATCCTTAAGAGAACTTAGCTCATCTTATATTGATCTTATCACAAATGAAGAAATCATTCAGATCATTACCACACCCAAGAATAGCCCTTCTTATTTGAACCTCATAGCCAATTTGAACAGAAGAAGGAAGATCGTTCATCGCTCGCATTCTGCTCCATCAGTTTTCACTGAAGCCAGAGTAGATGGTCACGATTCCTTTGACCATGGATTCTCACAAAAAACATCACCAAGAATTGTAAGACTATCCTTTATTGGTGTCATCTTGTATGTGGCAACTGGGGTCTTAGTTTATTTGGTAAGTGGGAATTTCAAGGGCACATCCACCTACAAGCCAGTGGATGCTTTGTACTTCACAGTGGTAACTCTCTGCACAGTAGGATATGGTGACATTGTCCCAGACACAGCGTTCACCAAAATCTTTACCTGTGGATTCATTCTGGTGGGTTTCGGATTCATCGGCATTCTGCTGAATGGCTTGGTCACCTACATTTGTGATAGACAGGAGGAAATATTACTGGGTGCCATGGATGAGAATCGATTTAATACACTAGTTAAATCATATATGATAGACAAAGAGAAAGGAAGAATGAGGATAAGAACCAAAGTATGTCTAGCTTTGACAGTGGTTGTTTGTTGCATTGCTATAGGAACAATTTGTGCTCGCTGCCTTGAGAAGTTGGATTGGCTGGACAGTTTTTATCTCTCTGTTACTTCTGTAACAACAGTGGGTTATGGGGATTATGCTTTCACTACTGAGGGTGGGAGGTGTTTTGCATCATTATGGCTCTTGGTGAGCTCATTGGCAGTTGGTAGGGCCTTTCTGTATCTAACTGAATACAGTATTGACAAGAGAAATCGAAGTATTGCAAAATGGATTCTGCACAAAAAGATTACCTTATCGGATTTAGTGGCTGCTGACCTTGACAATGACGGATCAATCAGCAAGTCTGAATTTGTCATCTATAAGCTTAAAGAGATGGGGAAGATAACTGAGAATGACATTCTACAGATAGGCAAACAATTTGACTCGTTGGACATTGGCCAGTGTGGCAAGATTACTCTTGCTGATCTAATGGAAACTGCATAA 1173 0.4143 MDETLLSKKRGTVAESSSRPPSLTSSRPPSLRELSSSYIDLITNEEIIQIITTPKNSPSYLNLIANLNRRRKIVHRSHSAPSVFTEARVDGHDSFDHGFSQKTSPRIVRLSFIGVILYVATGVLVYLVSGNFKGTSTYKPVDALYFTVVTLCTVGYGDIVPDTAFTKIFTCGFILVGFGFIGILLNGLVTYICDRQEEILLGAMDENRFNTLVKSYMIDKEKGRMRIRTKVCLALTVVVCCIAIGTICARCLEKLDWLDSFYLSVTSVTTVGYGDYAFTTEGGRCFASLWLLVSSLAVGRAFLYLTEYSIDKRNRSIAKWILHKKITLSDLVAADLDNDGSISKSEFVIYKLKEMGKITENDILQIGKQFDSLDIGQCGKITLADLMETA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1852 390 MobiDBLite consensus disorder prediction 10 31 - -
Mibi05g1852 390 FunFam Two-pore potassium channel 2-like 209 333 - -
Mibi05g1852 390 SUPERFAMILY Voltage-gated potassium channels 103 192 - -
Mibi05g1852 390 Pfam Ion channel 237 305 IPR013099 -
Mibi05g1852 390 Pfam Ion channel 115 192 IPR013099 -
Mibi05g1852 390 Gene3D - 209 326 - -
Mibi05g1852 390 Gene3D - 93 208 - -
Mibi05g1852 390 PRINTS Two pore domain K+ channel signature 149 177 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mibi05g1852 390 PRINTS Two pore domain K+ channel signature 269 278 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mibi05g1852 390 SUPERFAMILY EF-hand 333 388 IPR011992 -
Mibi05g1852 390 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Mibi05g1852 390 FunFam Two-pore potassium channel 2-like 106 202 - -
Mibi05g1852 390 SUPERFAMILY Voltage-gated potassium channels 220 325 - -
Mibi05g1852 390 MobiDBLite consensus disorder prediction 1 31 - -
Mibi05g1852 390 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 64 364 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1852 Mibi-ChrMibi05 23459260 23461285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1852 74 388 Ion Channels AT4G18160 52.532 9.31e-107 319