Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1831 ATGGAAAGGGAAAATCAAGAAGAAGATCACAAGGGGATGATGAACAATGAAACTAGGCCAAGTATTAATGATGTCCCAAAAGCTGTTTCTCCAGTTTCATTTGCAACTGATCATCATCATCATCATCCTGAAGATCAAACCATCAGGCGACCACGTGGCCGGCCGGCGGGGTCAAAGAACAAGCCAAAGCCACCCATTATAGTCACTAGGGATAGTGCCAATGCCCTAAGAGCTCATGCCCTAGAAGTCACATCAGGATGTGACATCAATGAAAGTTTGCTCAATTTTGCAAGAAGGAAACAAAGAGGGATTTGCATACTAAGTGGAACTGGTTGTGTCACAAATGTTACACTTCGTCAACTAGCCTCTTCTGGTGCCACTGTGACACTCCATGGTAGGTTTGAGATTCTCTCTCTTCTTGGGTCAATCCTGCCACCGCCGGCCCCACCGGGGATCACCGGACTGACCATTTACCTCGCCGGAGCTCAAGGGCAAGTTGTGGGAGGAGCTGTGGTGGGTGCATTGGTTGCTTCAGGTCCTGTGGTGATTATGGCTGCTTCTTTTATGAATGCTACTTTTGATCGTCTTCCATTAATGGAGGATGAAGAGATTATTGGTCAGAATAATAATGGTAATAATAATCAGCATTACCATCAGAATAATGGTAGAAGCCATAATCATCATCATCTTCATCATCTTCACCACCTTGATGCCTCTGATTTGTATGGTATGCCTCAGAATTTGCTCACCAATGGCTCAATCCCTCCTGAGATATACTCATGGAGTACTACTCCTGGCCGTAACTTCTCAAAAGCCTGA 819 0.453 MERENQEEDHKGMMNNETRPSINDVPKAVSPVSFATDHHHHHPEDQTIRRPRGRPAGSKNKPKPPIIVTRDSANALRAHALEVTSGCDINESLLNFARRKQRGICILSGTGCVTNVTLRQLASSGATVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALVASGPVVIMAASFMNATFDRLPLMEDEEIIGQNNNGNNNQHYHQNNGRSHNHHHLHHLHHLDASDLYGMPQNLLTNGSIPPEIYSWSTTPGRNFSKA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1831 272 MobiDBLite consensus disorder prediction 208 231 - -
Mibi05g1831 272 FunFam AT-hook motif nuclear-localized protein 76 203 - -
Mibi05g1831 272 ProSiteProfiles PPC domain profile profile. 73 211 IPR005175 -
Mibi05g1831 272 MobiDBLite consensus disorder prediction 1 66 - -
Mibi05g1831 272 CDD DUF296 77 159 IPR005175 -
Mibi05g1831 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 77 189 IPR005175 -
Mibi05g1831 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 19 248 IPR014476 GO:0003680
Mibi05g1831 272 Gene3D - 76 205 - -
Mibi05g1831 272 MobiDBLite consensus disorder prediction 34 52 - -
Mibi05g1831 272 PIRSF ESCAROLA 1 271 IPR014476 GO:0003680
Mibi05g1831 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 73 198 - -
Mibi05g1831 272 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1831 Mibi-ChrMibi05 22899756 22900574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1831 4 261 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 63.953 3.53e-95 279