Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1829 ATGCAGACAGATCACAGAAAAAAGAGTTCAACAGAGATTGAATTTTTCTCTGAATATGGTGATGCCAACCGTTATAAAATTCAAGAAGTCATAGGAAAAGGAAGTTATGGTGTTGTTTGTTCAGCAATTGACACCCACACTGGAGAGAAAGTGGCAATAAAGAAGATACATGACATCTTTGAGCATATATCTGATGCAGCCCGCATTCTTCGTGAGATAAAGCTGCTCAGACTTCTACGACATCCAGATATCGTTGAAATTAAACACATTATGCTGCCTCCTTCTAGCAAGGACTTTAAAGATATTTATGTTGTTTTTGAGCTAATGGAGTCTGATCTTCACCAAGTCATTAAAGCTAATGATGACTTAACAAAAGAGCACTATCAGTTTTTTCTTTACCAGCTGCTTCGAGCACTGAAGTATATTCACACTGCAAATGTCTATCATCGAGATCTGAAACCAAAGAATATATTGGCCAATGCAAATTGTAAACTCAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGTGATTCACCAACTACTATATTTTGGACGGATTATGTTGCTACAAGATGGTATAGAGCTCCTGAGCTTTGTGGATCATTTTACTCAAAGTATACACCGGCAATTGATATCTGGAGTATAGGTTGTATCTTTGCGGAAGTACTAACGGGAAAACCACTTTTTCCTGGTAAAAATGTCGTCCATCAGCTGGATCTGATGACTGATCTGCTTGGGACTCCCTCATTGGATACTATATCCCGGGTTCGTAATGATAAGGCAAGGAGATATCTGACTAGCATGAGGAAAAAGCAACCTGTGTCATTTGCACAGAAATTTCCTAATGCAGATCCTTCGGCTTTACGATTACTGGAAAGATTGCTCGCTTTTGATCCGAAAGACCGGCCTACTGCTGAAGAGGCATTGGCTGATCCTTACTTTAAGGGATTGGCCAAAGTTGAGAGGGAACCTTCCTGCCAGCCTATCAGTAAAATGGAGTTTGAGTTCGAAAGGCGAAGAGTGACAAAGGAGGAAGTTAGAGAGCTAATTTTCCGTGAGATTTTAGAGTATCATCCACAACTATTGAAAGACTACATAAATGGAACAGAGAGACCTAATTTTCTTTATCCAAGTGCTGTTGATCACTTCAGGAAGCAGTTCGTTCATCTTGAGGAAAATAATGGTAAAAATGGCCCCACTATGCCTCTTGAAAGGAAGCATGTTTCTCTTCCAAGGTCCACGATTGTGCATTCAAATATGGTTGCACCGAAAGAGCAATCGGATATCAATTCCGGGAAAAACAGGCAAACATCTGAGGAATATAATAAGAACCCCAGAGACACAGAAATTTCTGTAACTAGGTCCATGCAGGGGCAGCTGAGAGTCCCAGTAGCAAAACCTGGAAAAGTTGTCGGGCCGGTTGTTCCGTATGAGTATGCTAGTGTGGTGAAGGACTCTTATGATCCAAGGACATTTATCAGAGGTTCTATGCTTCCTTCTCAAGCTGTTCACCCGGCTTATTATTACCAAAGATCGAGCTCTGGAAATCAAGAAAGGTCAGCCACAACAGAATCTGATAAGGGTGTATCTGTGCAAGCCAAACACATGCATTCTGAAGTTCGTGCCAAAATAGCGCCGGATATAGCTATTAATATTGATACGAACCCTTTTTTTATGACACGAGCAGGAGTGAACGGCATCGAACCGGATGATCGAATAGCTATGGACTCCACGAGTCTCATGCCGACAAAGGCTCAGTATGGTCGGATCAGTGCTGCCACAACGGGGACTACTGCTCATAGAAAGGTTGGTCCAGTTCAGTATGGCATGACTGGTATGTTTTAG 1851 0.4171 MQTDHRKKSSTEIEFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSSKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDSPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVSFAQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKMEFEFERRRVTKEEVRELIFREILEYHPQLLKDYINGTERPNFLYPSAVDHFRKQFVHLEENNGKNGPTMPLERKHVSLPRSTIVHSNMVAPKEQSDINSGKNRQTSEEYNKNPRDTEISVTRSMQGQLRVPVAKPGKVVGPVVPYEYASVVKDSYDPRTFIRGSMLPSQAVHPAYYYQRSSSGNQERSATTESDKGVSVQAKHMHSEVRAKIAPDIAINIDTNPFFMTRAGVNGIEPDDRIAMDSTSLMPTKAQYGRISAATTGTTAHRKVGPVQYGMTGMF 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1829 616 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Mibi05g1829 616 MobiDBLite consensus disorder prediction 422 440 - -
Mibi05g1829 616 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Mibi05g1829 616 CDD STKc_TDY_MAPK 24 361 - -
Mibi05g1829 616 MobiDBLite consensus disorder prediction 512 532 - -
Mibi05g1829 616 MobiDBLite consensus disorder prediction 422 447 - -
Mibi05g1829 616 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1829 616 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Mibi05g1829 616 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1829 616 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Mibi05g1829 616 FunFam Mitogen-activated protein kinase 15 118 - -
Mibi05g1829 616 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 373 - -
Mibi05g1829 616 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mibi05g1829 616 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1829 616 MobiDBLite consensus disorder prediction 512 531 - -
Mibi05g1829 616 FunFam Mitogen-activated protein kinase 111 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1829 Mibi-ChrMibi05 22849035 22854037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1829 1 447 MAP Kinase Gene Family AT2G42880 85.011 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mibi05g1829 Pkinase 1.2e-68 CL0016