Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1805 ATGGCCGTGCCAATGCCAGCAACAACCACACCTTCCACACCTCTCGAAAAGATAAACCCCATCACAGTCCATAAAGCCGTCGAAGCTCTCTTCAAATGGAAGAATTCCAAATCCGAGATCGAAAAACCCAACCTTTTCGACTCAGACGATGAATTCATCTACCTCGTACTCACACTCAATAAGCTCCCTCCCAAATCCCGCGTTAATGCCCACAAGATCCCACTTCCTCATTCCCTTATATCTGAATTCGCCGAGAATTGTTTGATCATCGATGACAGACCAAAATCGAATCTTTCGAAAGATGATGTGAAGAAGAAGATTAAATCGGAGAATGTTCCTGTTTCTAAGGTTATTAAGCTTTCTAAGCTTCAGTCCAATTATCGTCCCTTCGAGGCTAAGCGGAAGCTATGTGGGTCCTACCATATGTTTTTTGCTGATAAAGGGGTGATCCCTTTGCTTCCAAGGCTTTTGGGGAAGCAGTTCTTTAAGAAGAAGAAGATTCCTGTGCCTGTGGATTTGAAGCATAAGAATTGGAAGGAGCAGATTGAGAGGGCTTGCTCTTCGGCCTTATTGTTTTTAAGGACAGGTACGTGTAGTGTGGTGAGGGTTGCGAAGGTGGGAATGGAAAGTGATGAGATTGTTGGTAATGTGATTGCGGCTATTAGTGGGATTGTGGAGATTATTCCCAAAGGTTGGGGTTCTGTACGGTCTTTTCATTTGAAGCTGTTGGATTCACTTGCTTTGCCGCTTTATCAGGTGATTCCTGATATGAGATTGAAGATTGAGGGGGCTAAGAGTAAAGAGGAAGTTAAGGAAGAGGGTGGAGAGGTTGTGGAAGATGAGGCTAAGAAGGATGTTAAAGTTGTTAAGAAGAAGGGGAGGATCCATGAAGTAAGGTACATGGACGATAATGTGGGTAATGAAGTTAGTGAAGATGAGTCAGGTGTTGAGGAAGATGGGGATGTTGGAGAAGAAGATAATGAGGATGATGCAATGAGTGTTGAGCCAGTGGTCAATAAGAAGAAAAGGAAAGGATCAAAAACTGATAAAGGGGTTCTTGGTGAGATGAATAGTGAGAAAAAATTGAAGAAGGGAGTCAGGAACACGGATAAAAGTAAGAAAGATGGATTGTCTTCTAAGAGAAAGAAAGAAAATGATTTACCTGCTAATGATGATGTTTCTGGAAAGAAGAAGAAGGAAAGTGGAGAAGTGAAAGTGAAAGCTAAGAAAACTAAGGCTGCTTCTGCTGAGTAA 1254 0.4234 MAVPMPATTTPSTPLEKINPITVHKAVEALFKWKNSKSEIEKPNLFDSDDEFIYLVLTLNKLPPKSRVNAHKIPLPHSLISEFAENCLIIDDRPKSNLSKDDVKKKIKSENVPVSKVIKLSKLQSNYRPFEAKRKLCGSYHMFFADKGVIPLLPRLLGKQFFKKKKIPVPVDLKHKNWKEQIERACSSALLFLRTGTCSVVRVAKVGMESDEIVGNVIAAISGIVEIIPKGWGSVRSFHLKLLDSLALPLYQVIPDMRLKIEGAKSKEEVKEEGGEVVEDEAKKDVKVVKKKGRIHEVRYMDDNVGNEVSEDESGVEEDGDVGEEDNEDDAMSVEPVVNKKKRKGSKTDKGVLGEMNSEKKLKKGVRNTDKSKKDGLSSKRKKENDLPANDDVSGKKKKESGEVKVKAKKTKAASAE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1805 417 CDD Ribosomal_L1 23 250 IPR028364 -
Mibi05g1805 417 Gene3D - 97 188 IPR016095 -
Mibi05g1805 417 SUPERFAMILY Ribosomal protein L1 48 251 IPR023674 -
Mibi05g1805 417 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 25 245 - -
Mibi05g1805 417 MobiDBLite consensus disorder prediction 307 332 - -
Mibi05g1805 417 MobiDBLite consensus disorder prediction 301 417 - -
Mibi05g1805 417 MobiDBLite consensus disorder prediction 333 417 - -
Mibi05g1805 417 FunFam Ribosomal protein L1p/L10e family 96 187 - -
Mibi05g1805 417 Pfam Ribosomal protein L1p/L10e family 47 245 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1805 Mibi-ChrMibi05 22334201 22335454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1805 139 241 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 30.097 1.37e-09 56.2