Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1804 ATGACCGTGCTAATTCCAGCAGCAGCCACACCTTCCACACCTCTCGAAAAAAATCTTTCAATAGATGATGCGAAGAAGAAGATTAAACCTGAGAATATTCCTGTTTCTAAGGTTATTAAGCTTTCTAAGCTTCACTCTAATTATCGTCCCTTCGAGGCTAAGCGGAAGCTATGTGGGTCCTATCACATGTTTTTCGCTGATAAAGGGGTGATCCCTTTGCTTCCAAGGCTTTTGGGGAGGCAGTTCTTTAAGAAGAAGAAGATTCCTGTGCCTGTGGATTTGAAGCATAAGAATTGGAAGGAGCAGATTGAGAGGGCTTGCTCGTCAGCATTCTTGTTTTTAAGGACAGGTACGTGTAGTGTGGTGAGGGTTGCGAAGGTGGGAATGGAAAGTGATGAGACTGTTGGTAATGTGATTGCGGCTATTAATGGGGTTGTGGAGATCATTCCCAAAGGTTGGGGTTCTGTACGGTCTTTTCATTTGAAGTTGTTGGATTCGCTTGCTTTGCCGATTTATCAGGTGATTCCTGATATGAGATTGAAGATTGAGGGGGCTAAGAGTGAAGAGAAAGAGAAAGAAGAGGGTGGAGAGGTTGTAGAAGATGAGGCTAAGAAGGATGTTAAAGTTGTTAAGAAGAAGGGGAGGATCCATGAAATTCGTTACATGGATGGTAATATTGATAATGAAGTTAGTGAAGATGAGTCAGGTGTTGAGGAAGATGGGGATGTTGGAGAAGAAGATAATGAGGATGATGAAATGAGTGTTGAACCAGTGAAATTGAAGAAGGGAGCGAAGAACAAGGATAAAAGTAAGAAAGATGGGTTGTCTTCTAAGAGGAAGAAGGAGAATGATTTACCTGCTAAGGATGATGTTTCAGGAAAGAAGAAGAAGAAGGAAAGTGGAGAAGTGAAAGTCAAAGCTAAGAAAACTAAGAAGGCTGCTTCTGCTGTCTAA 954 0.4193 MTVLIPAAATPSTPLEKNLSIDDAKKKIKPENIPVSKVIKLSKLHSNYRPFEAKRKLCGSYHMFFADKGVIPLLPRLLGRQFFKKKKIPVPVDLKHKNWKEQIERACSSAFLFLRTGTCSVVRVAKVGMESDETVGNVIAAINGVVEIIPKGWGSVRSFHLKLLDSLALPIYQVIPDMRLKIEGAKSEEKEKEEGGEVVEDEAKKDVKVVKKKGRIHEIRYMDGNIDNEVSEDESGVEEDGDVGEEDNEDDEMSVEPVKLKKGAKNKDKSKKDGLSSKRKKENDLPAKDDVSGKKKKKESGEVKVKAKKTKKAASAV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1804 317 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 23 166 - -
Mibi05g1804 317 MobiDBLite consensus disorder prediction 254 309 - -
Mibi05g1804 317 FunFam Ribosomal protein L1p/L10e family 17 108 - -
Mibi05g1804 317 MobiDBLite consensus disorder prediction 223 317 - -
Mibi05g1804 317 CDD Ribosomal_L1 14 171 IPR028364 -
Mibi05g1804 317 SUPERFAMILY Ribosomal protein L1 35 172 IPR023674 -
Mibi05g1804 317 MobiDBLite consensus disorder prediction 228 253 - -
Mibi05g1804 317 Pfam Ribosomal protein L1p/L10e family 25 166 IPR028364 -
Mibi05g1804 317 Gene3D - 18 109 IPR016095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1804 Mibi-ChrMibi05 22217550 22218790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1804 60 162 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 6.70e-10 56.6