Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1785 ATGGAGGTTTTTAACTGTGTTGAAAGTGCTGACCTACACTCTTACTACTGTAGCCTATCTTGCTTGGTCTCTGATATTCTAATATTCTTCCAATTCTTCTGTTTTCTTATTGGGATTCTTCAATTGTTAGACTATGGTGATAAAGCTGAAGATGCAGTTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACAGAAATTGCAAATGAAGAGGAAAATTTACTGCCCAAAAAGGAATTTTTTTCTGTTGAAGCCTCTCTGGAAGCTTTGAAATCCAGATCTTCTGTCTTTGATGATGAAGATTATGATGAGGAATCTGAAAAGGAGCAAGACTTGGCGAATTACACTTCTGAATTTAATAACACCTCTTCAGCTGGGGAGCCATCAGAGTCTCTTGTTGATGCATCTATAGGAGAGAAAAGCCAAGAACTTGAATCACATGATGGTTCACAGCAGTCTGAAGAATTGAACACTGACTTGCAAAAGCCCCAGGAGGAGAAGGAAGAGATGAAGAGGGAGGAGCTGCAGATAGAAGACCATAGTTTGAGAGCTACAGATGAAAGAACAGAATTTGAAATTTGCAGATCGATGTCTTGGACTTCAGTGAACAGTGGGTTCCACCTAATCCCACTGTCATCGAACAAGTTCAATGAGAAGGCGAAGACTCATTGCCACCACTAAGGCAACAGGGCTGAAGTTCAAAATGGTTTATCAGGAAGCAGAGATGCAGACTTGGATTCATCAAAATTTGGATTTCTTCGTGGAGCTGCCTCAATGACTGTGAAAGATGTTCGACAACAGAAGGACTCTTGTCTTAGTGCTGAACCAATGAAACATGATTGCTCAGGCCTTTCTTGGGAAGGGCATTCTCTCTTATGTACTGACTTTTATCCCTTTGATCTGCAAGACTGGGAAGATCTAATCATTTGGGGTGATTCCCCTGTGGCAAGCAACAATAACCATGAGAGCTCTGAAAATTTTGGATCTGCATTGGGGCCTCTAGGGTGTGATGAAATAGAAACTGATAGTGGGACATTAAATATCCAGTTTGAGCCGCTGAAGGAATTGCAAGAAAAAAATCATAGCGTATTTTTGCGCAGCTCTCCTGTCTCATTGGAGCCCTTTGGTTCAAGGGATTCTTCAGGAGCTAAAACCAATTCATCGTCAAAGAATCTATTTCATACGCAACTCTTGAGGTTAGAATCCAGACCTGAAGTGGACATCTCTAATCCTGCAGACGACAGAAGGGAGATTATATCTGAGGAGCGTAATCAAAACGGACTAGTGAAGCATTTCACCAAACTTGCCTTGCAAAACCAGGATATGATGGATGGGTCTTGGTTAGACAAGATTATATGGGAGGAGTTTGATAGACCTATTGTGAAACCAAAGCTAATTTTTGATCTTCAGGACGATCAAATGCAGTTTGAAGTCTCGGATAGTAAGGATGGTAGACATCTTCCCCTGCATGCAAGGGCAATGATTTTAAATCGTCCTTTAAAAGCAAGCAATGGAGATTATTCTGGGCTACCTGGACATGGAAATCAGCATGGATGGCGATCCATTGCTAATGACAAACATTATTCAAACAGAAAAACTTCCCAGCAACTGAAATCACATTCTAAAAATCGCTTAGCTCTTGGCGTAAAAGTTTTTCACTCTCGACCTGCGCTGAAGCTTCAGACGACGAAATTGAAACTTAGCAACAAAGATATTGCCAATTTTCACCGACCAAGAGCTTTCTGGTATCCTCATGATAATGAGATGGTTGTCAAAGAACAAGGGAAACTGCCAACACAAGGACCAATGAAAGTTATCATGAAGAGCTTGGGTGGCAAGGGGAGTAAACTGCTTGTTGATGCCGAAGAAACTCTCTCTTCTGTTAAAGCAAAAGCATCTAAAAAGCTAGATTTCAAACCATTGGAAACTGTGAAAATATTTTATCTTGGGAAGGAACTTGAAGATCAGAAATCACTTGCTGCACAAAATGTTCGACCAAATTCCTTGTTACATCTTGTTCGTTCAAAGATACATTTGTGGCCTAGGGCACAAAGGGTTCCTGGTGAGAACAAATCCCTGCGTCCACCTGGGGCATTCAAGAAAAAGTCTGACCTATCTGTTAAAGATGGACATGTTTTTCTAATGGAGTACTGTGAGGAAAGACCTTTATTATTGAGCAATGCTGGAATGGGTGCCAGACTTTGTACATACTATCAAAAATGTTCACCAGATGATCAAGGTGGCTCTTTATTACACAACACAAACAGTAGCTTGGGGCATGTGATATCACTGGATCCTGCTGATAAATCTCCATTTCTTGGAGATTTAAAGCCTGGTTGCATTCAGTTATCGTTGGAGACAAACATGTATAGAGCACCCATATTTCCTCATAAAGTGCCATTAACCGACTACCTGCTGGTTCGGTCATCAAAGGGCAAGCTATCATTAAGACGGATTGATAAAATTAGCGTTGTTGGACAGCAGGAGCCTCTTATGGAGGTATTGTCACCTGGAAGTATGAATCTTCAGACATATATGATGAACAGGCTACTGGTACACATGTGCCGTGAATTTCAGGCTGCAGAGAAGAGGCATTTACCTCCATACATTCGTGTAGATGAGCTGCTATCTCAGTTTCCTTACCTATCAGAAGCTTCTTTTCGCAAGAGAATTAAGGAATATGCTATTTTAAAGAAGGGAACAAATGCACAGTCTATTTTGGTTAAAAAGCGAAAATTTCGCATGTGGTCAGAGGATGAATTGAGAAAAATGGTGACGCCAGAGCTTGTTTGTGCTTATGAAAGCATGCAAGCTGGTCTCTGCCGTCTAAAGCATTTAGGAATTACCGAAATTCATCCTACTAATATATCTTCTGCTATGAGTCGGCTCCCTGATGAAGCAGTTGCACTGGCGGCTGCATCTCACATTGAGAGGGAACTACAAATCACTCCATGGAACCTGAGTAGCAATTTTGTTGCCTGCACCAGCCAGGGGAAGGAAAATATTCAGCGATTGGAAATTAATGGTGTTGGTGATCCATCTGGACGTGGTTTGGGTTTTAGCTATGCCCGGGCTCCTCCAAAGGCACTGGTGTCAAGCGCAGTGGTGAAGAAGAAAACAGCTGCTGCTCGGGGTGGTTCCACTGTTATTGGAACAGATGCTGATCTACGCAGATTGAGCATGGAGGCTGCTCAAGAGATTCTTATTAAGTTCAATGTTCCTGAGGAAGTCATTGCAAAACAAACCAGGTGGCATCGGATTGCTATGATACGCAAACTTTCAATTGAGCTAGCAGCATCTAGAGTGAAGGTTGATCCAACAATTATCAGCAAATATGCTCGTGCCCAGCGTATGTCCTTTCTTCAGTTACAGCAGCTGGCGAGGGAGAAGTGCCAGGAAATTTGGGATAGACAAGTTCAAAGTCTTTCAACTGCGAGTGGTGATGAAAATGAGAGTGATTCTGAAGGAAACAGTGATCTAGATTCTTTTGCTATTGATCTAGAAAATTTACTTGATGCTGAGGAGTGTGAAGAGGGAGAAGAGGGTACCGATGATTTTAAACTTGACAAGGCTGATGGTGTTAAGGGTCTTGAAATGAGAAGACGTCCAACCTTAGACCAGGCTGAGGAGGAAATAGAAGATGAAGCCGCTGAGGCTGCTGAACTATACAGATTACTCATTGATGATGATGAAGATGATAGGAGGAGGAAGAAGAAGACTAAATTTATTGTGGATGAAGCAGGACATCATGAATTTATGTCTGGAAAAGCAGGTGGAAAGTCAAGCTGGTTGGATCCTTCTGAGGGAGAAAAAAGTAGTTTGAAGACGAAAGTTCTTCCAGTGAAGTTCAAATGCAGCTCAGCTGAGAAACCTATTATTGAAGCCACACAGAGCTCTGATAAGCCAGTCACTTCTGACTCAGAAACTGCCAAGTCCGCTAAGATTGGTAGAATCTTGATTCCCAACAAAGTGAATTCAGATGATATGCAAACTGAGTCTCATAAACATGCCATCACCATTCGCCTTCCAACTGATCCAAGTAGAAGTCGAGTTGATTATCATAAGCCGTCAATTAAATTTCGACCACCTACAGAAACAGATAGGGAGCAGCCTCAAAAGAAAATTATTATAAGACGCACAAAGGATGTTATTGATCCAGACCAGTTCAGTCCTGGTGAAAACATGGGATTTGAGTACAGAAAAAGAAAAAGAATTGTTGAATTGTCAGATTTTGAGAGGCATAGAAAAGAGGAGATCATGTATAGACCTGAAGTTGCACTGGTAAAGCAGAAAGCCGAAGAGGATACAAGATGGCCGGATGAGCAAGAGAGACTCCGAAAAGAAGAGAGACTCCGGGAAGCAGAACATGCAAGTAGGCTTCATGACAGAGAAATAATGCTTAAAGAGCAAGAAAGATTAGCTGAGTTGAAAAGATGCAAAGAAAATAGCAGGAGAGAGAGGGAGGAGAAAGAACGGCAGAAAGCAAAGAAGAAGAAGAATAAAAAGAAGAAGAAGGAGGTTGAGTTTAGAGATGAGTATATAGATGACCAAAGAACAAGATTTAATAACACAGTGTTTGAAAGAGAACAGAGTGGAAAAAGATCTGCCGTAGAGTTGGGAAGGTATGCAGCAGAATATACACCGCCACCAAAGCGACGCAGAGGTGGAGGAGGAGAGGTTGGTTTGGCAAATATTTTGGAACGCATTCTTGAGGCGCTCAAAGAACGGCATGACCTGTCAGACCTTTTCTTGAACCCTGTGTCTAAGAAAGAAGCTCCGGATTACCTGGACATTGTAGAGAGACCCATGGATCTCTCAAACATCAGGGATAGAGTGAGGAGTATGGAGTACAAAAGCCGGGAAGATTTCAGACATGATGTGTGGCAGATTGCATATAATGCCCACAAATATAACGATGGGAGAAACCCACTAATTCCTCCTGTTGCTAATCAGCTTTTAGAATTTTGTGATTATTTGTTGAATGAGAATGATGATAGCCTAACTGAAGCTGAAGCTGGTATTAAAACAGGGGATTCCTAG 5046 0.4176 MEVFNCVESADLHSYYCSLSCLVSDILIFFQFFCFLIGILQLLDYGDKAEDAVDYEDIDEEYDGPETEIANEEENLLPKKEFFSVEASLEALKSRSSVFDDEDYDEESEKEQDLANYTSEFNNTSSAGEPSESLVDASIGEKSQELESHDGSQQSEELNTDLQKPQEEKEEMKREELQIEDHSLRATDERTEFEICRSMSWTSVNSGFHLIPLSSNKFNEKAKTHCHHXGNRAEVQNGLSGSRDADLDSSKFGFLRGAASMTVKDVRQQKDSCLSAEPMKHDCSGLSWEGHSLLCTDFYPFDLQDWEDLIIWGDSPVASNNNHESSENFGSALGPLGCDEIETDSGTLNIQFEPLKELQEKNHSVFLRSSPVSLEPFGSRDSSGAKTNSSSKNLFHTQLLRLESRPEVDISNPADDRREIISEERNQNGLVKHFTKLALQNQDMMDGSWLDKIIWEEFDRPIVKPKLIFDLQDDQMQFEVSDSKDGRHLPLHARAMILNRPLKASNGDYSGLPGHGNQHGWRSIANDKHYSNRKTSQQLKSHSKNRLALGVKVFHSRPALKLQTTKLKLSNKDIANFHRPRAFWYPHDNEMVVKEQGKLPTQGPMKVIMKSLGGKGSKLLVDAEETLSSVKAKASKKLDFKPLETVKIFYLGKELEDQKSLAAQNVRPNSLLHLVRSKIHLWPRAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGARLCTYYQKCSPDDQGGSLLHNTNSSLGHVISLDPADKSPFLGDLKPGCIQLSLETNMYRAPIFPHKVPLTDYLLVRSSKGKLSLRRIDKISVVGQQEPLMEVLSPGSMNLQTYMMNRLLVHMCREFQAAEKRHLPPYIRVDELLSQFPYLSEASFRKRIKEYAILKKGTNAQSILVKKRKFRMWSEDELRKMVTPELVCAYESMQAGLCRLKHLGITEIHPTNISSAMSRLPDEAVALAAASHIERELQITPWNLSSNFVACTSQGKENIQRLEINGVGDPSGRGLGFSYARAPPKALVSSAVVKKKTAAARGGSTVIGTDADLRRLSMEAAQEILIKFNVPEEVIAKQTRWHRIAMIRKLSIELAASRVKVDPTIISKYARAQRMSFLQLQQLAREKCQEIWDRQVQSLSTASGDENESDSEGNSDLDSFAIDLENLLDAEECEEGEEGTDDFKLDKADGVKGLEMRRRPTLDQAEEEIEDEAAEAAELYRLLIDDDEDDRRRKKKTKFIVDEAGHHEFMSGKAGGKSSWLDPSEGEKSSLKTKVLPVKFKCSSAEKPIIEATQSSDKPVTSDSETAKSAKIGRILIPNKVNSDDMQTESHKHAITIRLPTDPSRSRVDYHKPSIKFRPPTETDREQPQKKIIIRRTKDVIDPDQFSPGENMGFEYRKRKRIVELSDFERHRKEEIMYRPEVALVKQKAEEDTRWPDEQERLRKEERLREAEHASRLHDREIMLKEQERLAELKRCKENSRREREEKERQKAKKKKNKKKKKEVEFRDEYIDDQRTRFNNTVFEREQSGKRSAVELGRYAAEYTPPPKRRRGGGGEVGLANILERILEALKERHDLSDLFLNPVSKKEAPDYLDIVERPMDLSNIRDRVRSMEYKSREDFRHDVWQIAYNAHKYNDGRNPLIPPVANQLLEFCDYLLNENDDSLTEAEAGIKTGDS 1681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1785 1681 Coils Coil 1468 1514 - -
Mibi05g1785 1681 Gene3D - 1553 1680 IPR036427 GO:0005515
Mibi05g1785 1681 ProSiteProfiles Ubiquitin domain profile. 605 675 IPR000626 GO:0005515
Mibi05g1785 1681 CDD Ubl_TAFs_like 605 676 - -
Mibi05g1785 1681 CDD Bromodomain 1567 1662 - -
Mibi05g1785 1681 SMART ubq_7 605 677 IPR000626 GO:0005515
Mibi05g1785 1681 PRINTS Bromodomain signature 1610 1628 IPR001487 GO:0005515
Mibi05g1785 1681 PRINTS Bromodomain signature 1628 1647 IPR001487 GO:0005515
Mibi05g1785 1681 PRINTS Bromodomain signature 1594 1610 IPR001487 GO:0005515
Mibi05g1785 1681 PRINTS Bromodomain signature 1580 1593 IPR001487 GO:0005515
Mibi05g1785 1681 Gene3D - 587 677 - -
Mibi05g1785 1681 MobiDBLite consensus disorder prediction 1486 1505 - -
Mibi05g1785 1681 Pfam Bromodomain 1568 1645 IPR001487 GO:0005515
Mibi05g1785 1681 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1264 1678 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Mibi05g1785 1681 Pfam Protein of unknown function (DUF3591) 524 1091 IPR022591 -
Mibi05g1785 1681 MobiDBLite consensus disorder prediction 1348 1369 - -
Mibi05g1785 1681 Pfam Ubiquitin family 610 678 IPR000626 GO:0005515
Mibi05g1785 1681 SUPERFAMILY Ubiquitin-like 575 675 IPR029071 -
Mibi05g1785 1681 Coils Coil 1207 1227 - -
Mibi05g1785 1681 MobiDBLite consensus disorder prediction 161 184 - -
Mibi05g1785 1681 Coils Coil 155 175 - -
Mibi05g1785 1681 SUPERFAMILY Bromodomain 1549 1670 IPR036427 GO:0005515
Mibi05g1785 1681 ProSiteProfiles Bromodomain profile. 1577 1647 IPR001487 GO:0005515
Mibi05g1785 1681 MobiDBLite consensus disorder prediction 115 132 - -
Mibi05g1785 1681 FunFam Transcription initiation factor TFIID subunit 1 587 677 - -
Mibi05g1785 1681 SMART bromo_6 1557 1667 IPR001487 GO:0005515
Mibi05g1785 1681 MobiDBLite consensus disorder prediction 100 184 - -
Mibi05g1785 1681 ProSitePatterns Bromodomain signature. 1582 1639 IPR018359 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1785 Mibi-ChrMibi05 21636159 21649521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1785 605 675 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 38.028 1.06e-07 51.6