Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1783 ATGGAAGACGCCACCAAATCCCTAACACGCTTCACTCTCGGCCGCCAATCTTCTAAGGCGCCTGAACGCCGTCACTCCGGCGACGACATTGGATCGGAGGCATTGGATTCGAGCGTTAGGCTGATGTATTTGGCGAATGAAGGCGATTTGGATGGAATCATTGAGCTTTTGGATTCTGGAAATGATGTCAATTTCAGAGATATTGATAGCCGCACCGCCTTGCATGTCGCCGCTTGTCAGGGTTTCACCCATGTCGTTGAATTGCTCATCCGAAGGGGCTCCGAGGTCGATCCGAAGGACCGGTGGGGAAGTACGCCTCTAGCAGATGCAATGTACTACAAAAATCATGATGTTGTAAAACTTTTGGAGAAACATGGAGCAAAACCTCTGATGGCTCCCATGCACGTCCAAAATGTTCGTGAAGTCCCAGAGTATGAGATTAACCCTTCTGAACTCGATTTTACGAATAGTGTTCGCATAACAAAGGGGACTTTTCGTGATGCATCATGGCGTGGCACTCATGTTGCTGTCAAAACACTTGGGGCGGAAGTATTAACTGACGATGACAAAGTAAAAGCATTTCATGATGAGCTTGCATTACTTCAAAAATTACGGCATCCAAATGTAGTCCAATTTTTAGGTGCTGTAACACAGAGCACCCCGATGATGATTGTCACAGAATATCTACCTCAGGGAGATCTTCGTGCCTATTTGAAAAGGAGAGGTGCGTTAAAACCAATAACAGCTGTGAAGTTTGCACTCGACATTGCGAGGGGAATGAACTATTTGCATGAACGTAAACCAGAAGCAATTATACACCGAGATCTTGAACCTTCAAATATACTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGGGTTAGCAAGTTATTAAAAGTGGCAAAAACTGTCAAAGAAGACAAACCTGTGACTAGCAAGGATACTTCTTGGCGCTATGTTGCTCCAGAGGTTTATAAAAATGAGGAATATGATATCAAAGTTGATGTCTTTTCATTCGCTCTAATATTACAGGAGATGATTGAAGGTTGTCCACCATTTCATGCAATGCCTGAAAAAGATGTTCCCAAAGCATATGTGGCAAATGAGCGCCCACAGTTCAAGGCTTCATCTAGGGTTTATGCGCATGGACTGAAAGAGTTAATTGTGGAATGTTGGGATAAAGAACCGCACAGAAGACCTATGTTTGGACAAATAATTGAGAGACTGGAAAGCATCAGTAGCCATCTTGCAAGTGAAAAGCGCTTAGAGGATTGTACCTCTAGATGCTTCCCGAATCTGAGGACTTTGTTTCAGCGACATCGGACAAATCCAGGAAGCCGATCATCTCGATTGATGACTTGA 1368 0.443 MEDATKSLTRFTLGRQSSKAPERRHSGDDIGSEALDSSVRLMYLANEGDLDGIIELLDSGNDVNFRDIDSRTALHVAACQGFTHVVELLIRRGSEVDPKDRWGSTPLADAMYYKNHDVVKLLEKHGAKPLMAPMHVQNVREVPEYEINPSELDFTNSVRITKGTFRDASWRGTHVAVKTLGAEVLTDDDKVKAFHDELALLQKLRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLRAYLKRRGALKPITAVKFALDIARGMNYLHERKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTSKDTSWRYVAPEVYKNEEYDIKVDVFSFALILQEMIEGCPPFHAMPEKDVPKAYVANERPQFKASSRVYAHGLKELIVECWDKEPHRRPMFGQIIERLESISSHLASEKRLEDCTSRCFPNLRTLFQRHRTNPGSRSSRLMT 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1783 455 MobiDBLite consensus disorder prediction 17 31 - -
Mibi05g1783 455 CDD STKc_MAP3K-like 168 411 - -
Mibi05g1783 455 FunFam Integrin-linked protein kinase family 21 145 - -
Mibi05g1783 455 FunFam serine/threonine-protein kinase STY46-like 147 230 - -
Mibi05g1783 455 SUPERFAMILY Protein kinase-like (PK-like) 160 417 IPR011009 -
Mibi05g1783 455 Pfam Protein tyrosine and serine/threonine kinase 160 411 IPR001245 GO:0004672|GO:0006468
Mibi05g1783 455 FunFam Os01g0748600 protein 140 431 - -
Mibi05g1783 455 Gene3D Transferase(Phosphotransferase) domain 1 141 420 - -
Mibi05g1783 455 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 115 421 - -
Mibi05g1783 455 PIRSF ILK 2 432 - -
Mibi05g1783 455 MobiDBLite consensus disorder prediction 1 31 - -
Mibi05g1783 455 SMART ANK_2a 36 65 IPR002110 GO:0005515
Mibi05g1783 455 SMART ANK_2a 102 131 IPR002110 GO:0005515
Mibi05g1783 455 SMART ANK_2a 69 98 IPR002110 GO:0005515
Mibi05g1783 455 ProSiteProfiles Protein kinase domain profile. 119 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1783 455 Gene3D - 33 140 IPR036770 -
Mibi05g1783 455 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Mibi05g1783 455 Pfam Ankyrin repeats (3 copies) 41 129 IPR002110 GO:0005515
Mibi05g1783 455 SUPERFAMILY Ankyrin repeat 40 130 IPR036770 -
Mibi05g1783 455 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1783 Mibi-ChrMibi05 21620255 21626790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1783 10 434 MAP Kinase Kinase Kinase AT4G18950 66.204 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Mibi05g1783 PK_Tyr_Ser-Thr 3.4e-55 CL0016