Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1777 ATGCATAATAATGCAGTTGATGCATTGAAAGAGATAGCGAGGAAAATAGGGAAGAATGATTGGGACTTTGAAGGAGAGGGTCCTTGCAGTGGGAAAGGGCAGTGGAATGCTTCTAATGAGAACACACACTTTGAGAGCATTGTCGACTGTAAATGTAACAATTCTTCTAATTGCCATGTTGTAAGCATATCCTTGAAGGCTCAGAATCTTTTGAGAACTGTCCCGCCAGAATTTTCCAAGCTAAATCATCTCAAGAAACTGACCCTGAGTCTTAACGTTCTCAATGGTTCTATACCTGACGAATGGGCTAGTATGCAATTGGTTGACCTTGCAATTATGGGAAACAATTTGTCAGGTCCATTCCCCACAGTTCTCCTGAACATCACGACTCTCAAGAGCCTGATTATTGAAGGAAATAAATTTTGGGGTCCCATTCCACCAGCTATTGGAAAGTTAATCAATTTAGAAAAACTCCACCTGTCGTCAAATGCATTCACTGGAGAATTGCCAGTTGAACTTTCCGAGCTGAAGAATATGACTGATTTACGGATAAGTGACAATAACATCTCTGGGAGGATTCCTGATTTTATTGGTAATTGGATATTAATTCAAAGATTGCACATGGAGGGTTGCTCTCTTGAGGGGCCCATACCTTCAAGCATTTCAGGCTTGACAAGCTTAAGGGATTTGAGGATAACTGACCTAAAAGGTGGAACCTCTGATTTCCCATCATTAAGTAAGATGAAATACATGGAAAAATTGGTATTGAGGAACTGTATGATTCAAGGGGAGATCCCAGAAGAAATTGGGAGAATGGAAAACCTGACAACCTTAAGTAGAGTTAATCCATGCCTGAAAAGGAACTTCCCTTGTCCTGCTTCGACCAAGCAATTTGTCTCTTCAACAGATCATTATTCAATGCATGTTAACTGTGGTGGTAAAGAAGCGAATATCAATGATATAATATATGAATCGGACCCAGAAAAAAGAGGCGCTGCAGTGTTTTACTCCACCCAGAACTGGGCGCTTAGCAGCACAGGGGACTTCATGGACAATAATAACAACTTTGATGACTATATTCAGACCAATACTTCTACACTTCTCAATGTCTCTGTCATTGATTCACAACTGTACACAACAGCTCGCATATCTCCTCTCTCTCTCACATATTATGGACTCTGTCTCTTAAATGGAAACTATACTGTGAAGCTTCATTTCGCAGAGATTTTGTTCTTGAACAATAGATCATATTACAGTCTTGGGAGGAGGATATTTGATGTCTACATCCAGGGGAATTTGGTCCTGAAAGACTTCAATATAGAAAGTGAAGCTGGTGGTACTAGTAAGCCTGTTGTGAAGACATTCAATACTATAGTCACCCAGCATACCTTGAAAATTCACTTAATTTGGGCTGGAAAGGGCACAACAGGCATACCGCGACGAGGATATTATGGACCTCTAGTGTCTGCTATATCTGTGGATCCTATTCTTTTTCTTCTTGTCTTTGGTATCATGAGGTGGAAGGGCTGGCTAGGAGGCAATGACTCTGTGTATAAAGATCTTAGCGGTTTAGATCTGCAGATGGGATTATTTACATTAAGACAAATCAAAGCAGCTACTGAAAACTTCAATGCAGCCAACAAAATTGGGGAAGGTGGATTTGGCTCTGTTTACAAGGGTCTACTGCCAGATGGTAGAGTAATTGCAGTAAAGCAGCTCTCCTCAAAATCTACGCAAGGAATCAGTGAATTTGTGAATGAGTTAGGAATGATATCTGGGCTTCAACATCCCAATCTTGTTAAGCTTTTTGGATGTTGTGTGGAAGGAGACCAATTAATGCTGATATATGAGTATATGGAAAACAATTGTCTATCTCGTGTTCTTTTTGGTAAGCTTATTATTTCTTGGGCAAGTCAAGTGGACTTGTGCTTTGTCCTTGCTCATAAAGTACTATGGGCTATGGCAAACCACAAATTTGGCAACACTTAG 1989 0.4032 MHNNAVDALKEIARKIGKNDWDFEGEGPCSGKGQWNASNENTHFESIVDCKCNNSSNCHVVSISLKAQNLLRTVPPEFSKLNHLKKLTLSLNVLNGSIPDEWASMQLVDLAIMGNNLSGPFPTVLLNITTLKSLIIEGNKFWGPIPPAIGKLINLEKLHLSSNAFTGELPVELSELKNMTDLRISDNNISGRIPDFIGNWILIQRLHMEGCSLEGPIPSSISGLTSLRDLRITDLKGGTSDFPSLSKMKYMEKLVLRNCMIQGEIPEEIGRMENLTTLSRVNPCLKRNFPCPASTKQFVSSTDHYSMHVNCGGKEANINDIIYESDPEKRGAAVFYSTQNWALSSTGDFMDNNNNFDDYIQTNTSTLLNVSVIDSQLYTTARISPLSLTYYGLCLLNGNYTVKLHFAEILFLNNRSYYSLGRRIFDVYIQGNLVLKDFNIESEAGGTSKPVVKTFNTIVTQHTLKIHLIWAGKGTTGIPRRGYYGPLVSAISVDPILFLLVFGIMRWKGWLGGNDSVYKDLSGLDLQMGLFTLRQIKAATENFNAANKIGEGGFGSVYKGLLPDGRVIAVKQLSSKSTQGISEFVNELGMISGLQHPNLVKLFGCCVEGDQLMLIYEYMENNCLSRVLFGKLIISWASQVDLCFVLAHKVLWAMANHKFGNT 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1777 662 ProSitePatterns Protein kinases ATP-binding region signature. 549 571 IPR017441 GO:0005524
Mibi05g1777 662 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 170 236 - -
Mibi05g1777 662 Pfam Malectin domain 306 491 IPR021720 -
Mibi05g1777 662 SUPERFAMILY L domain-like 44 279 - -
Mibi05g1777 662 ProSiteProfiles Protein kinase domain profile. 543 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1777 662 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 7 169 - -
Mibi05g1777 662 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 304 496 - -
Mibi05g1777 662 Pfam Protein tyrosine and serine/threonine kinase 546 630 IPR001245 GO:0004672|GO:0006468
Mibi05g1777 662 SMART tyrkin_6 543 659 IPR020635 GO:0004713|GO:0006468
Mibi05g1777 662 SUPERFAMILY Protein kinase-like (PK-like) 529 640 IPR011009 -
Mibi05g1777 662 Gene3D Phosphorylase Kinase; domain 1 515 618 - -
Mibi05g1777 662 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 8 646 - -
Mibi05g1777 662 Gene3D Ribonuclease Inhibitor 172 298 IPR032675 -
Mibi05g1777 662 Gene3D Ribonuclease Inhibitor 26 171 IPR032675 -
Mibi05g1777 662 Gene3D - 301 494 - -
Mibi05g1777 662 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 513 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1777 Mibi-ChrMibi05 21531830 21540763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1777 5 652 Receptor kinase-like Gene Family AT1G53430 42.308 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi05g1777 Malectin 6e-43 CL0202