Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1718 ATGGAAGGAGAAATATTGGTAATGCGGTTTAAGGAGATTGTTTCTGTGTGTGTTGGAATCTCCATGAGAGTTCTTGAACGAGTTCTTTTCGCTGCATTCACCTGCATTCTCGCTCTAGGAGGGTCAATAATGGGGACAATAGTGGGAGGGATGAAGGGTCAGAGATCAGAGGCTGGGATGCTTGAAGGAGCTGGCAAAGGAGCTGTCTCTGGAGCCATTGCTGCTCTTGAATTGCTTGATTTTTTAGCTGATGATGATCATCCTGAGCTTATGTCCAAGATTGCCCTATTAAGCAGACTATTCAATGGGAAGGTCCTAATGGAATGGGTATATCCTGGCTATCAATGGCATATTGGAATACCAGAAACAATATACAGAGAAGTATCAGATATTTTTTATAAGAGAGGAGTTCCAGGGCTGTCACAGGAATTCATTCAAACCCTCCCTTTGCATCAATTCAACTCCAACTCAAAAATGCCAACTTTATACATTGAATCTTGCTGCTCCATTTGCTTCCAGGAGTTTGAAGACGGAGATATGATAAGGTTGCTTCCAAGATGTGACCATATATTTCACTTTCACTGTATAGATAAATGGCTCATCCAACAAGGATCTTGCCCTATATGTAGAACTTATGTTCTTGAGGATCATTTTGATCTTTAG 663 0.4118 MEGEILVMRFKEIVSVCVGISMRVLERVLFAAFTCILALGGSIMGTIVGGMKGQRSEAGMLEGAGKGAVSGAIAALELLDFLADDDHPELMSKIALLSRLFNGKVLMEWVYPGYQWHIGIPETIYREVSDIFYKRGVPGLSQEFIQTLPLHQFNSNSKMPTLYIESCCSICFQEFEDGDMIRLLPRCDHIFHFHCIDKWLIQQGSCPICRTYVLEDHFDL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1718 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 214 IPR013083 -
Mibi05g1718 220 SMART ring_2 168 209 IPR001841 -
Mibi05g1718 220 Pfam Ring finger domain 168 210 IPR001841 -
Mibi05g1718 220 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 16 211 IPR044523 -
Mibi05g1718 220 CDD RING-H2_PA-TM-RING 167 210 - -
Mibi05g1718 220 ProSiteProfiles Zinc finger RING-type profile. 168 210 IPR001841 -
Mibi05g1718 220 SUPERFAMILY RING/U-box 157 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1718 Mibi-ChrMibi05 20719875 20722219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1718 24 213 C3H Transcription Factor Family AT5G66070 32.000 1.07e-32 116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1718 05 20719875 20722219 Mibi05g1718 05 20719875 20722219 ECH