Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1681 ATGGCGAGCGAAGAAGAGAGACATCTGGAGACTCAACTAGAGCTTCAATTACATGAACAGAGGGATTCTCTCTCTGCTATCAATGAAGCTTTGCTCTCTGATCCATCCAATCCTGAGCTCCTAGCGGTTCATGAGGAGCTTGTTCAAGCAATCAAGGATGCAGAGGAAGGACTTCTTCACTTAAAGCGCACTCGATTATTGCATGAAGCGGATTCAGTGCTAAATAGATCTAACCTTTCTTCTCAAACAGAGAAAGTTGAGCCACTTGACCCCTCAGTTGTTGAACCAGAACCTCTAGAGCAACAACAGTATTCTGTTGGATCTAAATGTAGATTCCGTCACACTGATGGGCGTTGGTACAATGGTCAAGTAGTGCAGTTAAATAGTTCTTCTGCAAAACTTTCATTCCTTATGCCTACGTCTGAGAATATGCTGATGTGCAAGTTTTTTCTGCAACAACGATGTCGGTTTGGCTCTAACTGTCGTCTATCACATGGTATTGATGTTCCGCTGTCTTCCCTAAGAAAACATGTTCCTACCATTTGGAAGCAGTCTCTTGTTGGTTCAGGTATATGGGCAGCCTCAGATGTTAAAGCTGGCATTTGGAAGGAAGCTGAGCTTGAATCCTGGGATGAAGAACTTGGAGTTGGCCAAGTTGTTTTCCGAGATGATGGAAGTTCTGTGAAGTTAGGAGCAGAAGCTATAGCGTTATCTGAACACGCAGAAGTAAGTGATGAAGAGAGTGATTCCAGCTTGGAACAGTCTGATTTTAGTGACTACGAAGGAGATAGCCCCCAAGGTTTAGGCTTTCTGGAAAGCACCAACCTGCAGCGAGGTGTTCAGACTGAAACTGCTATATTTGCTAAGTGGGAGAATCACACCAGGGGTGTAGCTTCCAAAATGATGGCTAATATGGGTTACCGTGAAGGTATGGGTTTAGGTGTTTCTGGTCAAGGAATGGTTGCTCCCATCCCAGTGAAGGTCCTCCCACCAAAGCAATCCTTAGATCATGCTCTTGAATTTCATAAAGATAAAGCAGAAGAGAGCAAAGACAGTCGAGGTAAGAAACGAAGTAGAGGCGGTAAGAGGAAGCGTGATAAGAAATTTGCAGAGGCAATTCGGGTAGCAAAAGAAGAGAGGGAATCAGTGTCAGATGTCTTTGCACTAATAAACAATCAGTTGGCAATGCATGGTGAAGCTATAATTGGTGGATTAGGGAAGAAGCAGCAAAGCAAAGATTCAGGGGAAGGTAAAAAGGTTGATAGGAGGGCTTTGCTTGCTTATGAGGACGAGATAAAGGACTTGAGGATTCGGGTTGAGAAGCTTGAAGAAATGGTTAATAGAAACAAAAGAGAGAAGGTAGTTTATGAGGCTGCTATGAGAAAGTTAATTGAAACTCGCAAGGCTTTAGCAGAGGCTGAGGCAGCTCATGTCTCCGCCTCAAATGCAGTAGCTAGCAAAGATAAAGAGAAGAGATGGCTTAAGTTTTAG 1491 0.4373 MASEEERHLETQLELQLHEQRDSLSAINEALLSDPSNPELLAVHEELVQAIKDAEEGLLHLKRTRLLHEADSVLNRSNLSSQTEKVEPLDPSVVEPEPLEQQQYSVGSKCRFRHTDGRWYNGQVVQLNSSSAKLSFLMPTSENMLMCKFFLQQRCRFGSNCRLSHGIDVPLSSLRKHVPTIWKQSLVGSGIWAASDVKAGIWKEAELESWDEELGVGQVVFRDDGSSVKLGAEAIALSEHAEVSDEESDSSLEQSDFSDYEGDSPQGLGFLESTNLQRGVQTETAIFAKWENHTRGVASKMMANMGYREGMGLGVSGQGMVAPIPVKVLPPKQSLDHALEFHKDKAEESKDSRGKKRSRGGKRKRDKKFAEAIRVAKEERESVSDVFALINNQLAMHGEAIIGGLGKKQQSKDSGEGKKVDRRALLAYEDEIKDLRIRVEKLEEMVNRNKREKVVYEAAMRKLIETRKALAEAEAAHVSASNAVASKDKEKRWLKF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1681 496 Pfam G-patch domain 294 336 IPR000467 GO:0003676
Mibi05g1681 496 Gene3D - 105 178 - -
Mibi05g1681 496 MobiDBLite consensus disorder prediction 239 264 - -
Mibi05g1681 496 MobiDBLite consensus disorder prediction 342 368 - -
Mibi05g1681 496 SMART c3hfinal6 141 167 IPR000571 GO:0046872
Mibi05g1681 496 SUPERFAMILY CCCH zinc finger 142 166 IPR036855 GO:0046872
Mibi05g1681 496 ProSiteProfiles G-patch domain profile. 294 340 IPR000467 GO:0003676
Mibi05g1681 496 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 1 496 - -
Mibi05g1681 496 SMART G-patch_5 292 338 IPR000467 GO:0003676
Mibi05g1681 496 Coils Coil 1 21 - -
Mibi05g1681 496 ProSiteProfiles Zinc finger C3H1-type profile. 141 168 IPR000571 GO:0046872
Mibi05g1681 496 Coils Coil 425 476 - -
Mibi05g1681 496 Pfam CCCH-type zinc finger 146 166 IPR041367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1681 Mibi-ChrMibi05 20319539 20324280 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi05g1681 G-patch 3.8e-12 CL0449