Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1653 ATGTTTAGGGTATCGATGACCGAGGGGATTTCCATATTAGTGAAATATGATGTTGAAACACTTTATGGTCATGGAGTAACAACTGAAGAAGGTGAGGTCAAACTTGGTTCTTTCTCATGGTTGGATTCTAAGTATTACGTGTTTCGTTGCATGTATGCGTTGATCAGGAACCACGATCTCAAGGGCTCTGATTGGGAACACGATATCGTCAGCTCACTAGAGGTCATGCCAAGCGTCGAGAAGGTCAAGGTAAATCATGTGTATAGGGAGGGTAATATCCATGCAGATGCTCTAGTAAATATCAGTTTTGTACGGGAGGATTTGTATTTAATATTTGATGCTCCTCCCCGCTGTATTAAGTCATTGATGTACAGAGATTGGGAATTGGCGCCTGGGCATTCCCGCATCATATCGCAGCCAAAAGCAAGAAAAGAAGTCTGTGACGATGCTTATGTAGCAATCGACGCGAAAAACGACACGGCGGTGCCCCCTATAAGGCCAATGGCATCATCTTCAGACTCATGGATGAAGGAATATAATGAAGCCGTGAAACTTGCTGATGATATCAGTGGCATGATTTCCGAACGGAATTCACTTCCTTCATCTGGACCTGATACTCAGCGCCACGCATCTGCTATAAGAAGGAAGATAACAATATTAGGGACCAGACTTGATAGCTTGCAATCCCTTTTGTCAAAGCTTCCTGGGAAACAGCCTATATCTGACAAGGAGCTGAATCGCCGTAAGGACATGGTTGCAAATTTGAGGTCAAAAGTTAACCAAATGGCGTCGACATTGAATATGTCTAACTTTGCAAACAGGGATAGTTTGCTTGGACCAGAGACAAAACCAGCTGATGCCATGAGCAGAACAGTTGGCTTGGATAACGGTGGACTTGTTGGACTTCAACGGCAAATTATGAGAGAGCAAGATGAGGGCCTTGAGAAATTGGAGCAGACTGTAACTAGTACGAAACACATTGCATTGGCTGTAAATGAAGAACTGGATTTGCACACTAGACTCATTGATGACTTGGACCAGCATGTAGATGTTACAGATTCTCGGCTGCGGAGGGTGCAGAAGAACTTGGCAATTCTGAATAAGCGTACTAAGGGTGGTTGCTCTTGCTTGTGTTTGCTTTTAGCAGTCGTGGGTATTGTGGTTTTGGTTGCTGTGATATTTGTGTTGATCAAATTTTTGTAA 1203 0.4356 MFRVSMTEGISILVKYDVETLYGHGVTTEEGEVKLGSFSWLDSKYYVFRCMYALIRNHDLKGSDWEHDIVSSLEVMPSVEKVKVNHVYREGNIHADALVNISFVREDLYLIFDAPPRCIKSLMYRDWELAPGHSRIISQPKARKEVCDDAYVAIDAKNDTAVPPIRPMASSSDSWMKEYNEAVKLADDISGMISERNSLPSSGPDTQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISDKELNRRKDMVANLRSKVNQMASTLNMSNFANRDSLLGPETKPADAMSRTVGLDNGGLVGLQRQIMREQDEGLEKLEQTVTSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCSCLCLLLAVVGIVVLVAVIFVLIKFL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1653 400 CDD SNARE_Qc 307 364 - -
Mibi05g1653 400 Pfam SNARE domain 341 391 IPR000727 -
Mibi05g1653 400 PANTHER SYNTAXIN 198 384 IPR045242 -
Mibi05g1653 400 SUPERFAMILY t-snare proteins 187 267 IPR010989 GO:0016020|GO:0016192
Mibi05g1653 400 Gene3D - 306 368 - -
Mibi05g1653 400 SUPERFAMILY SNARE fusion complex 296 365 - -
Mibi05g1653 400 SMART tSNARE_6 299 366 IPR000727 -
Mibi05g1653 400 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 304 366 IPR000727 -
Mibi05g1653 400 FunFam syntaxin-51 isoform X2 306 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1653 Mibi-ChrMibi05 19885285 19894640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1653 168 400 SNARE and Associated Proteins AT1G16240 72.103 1.32e-121 350
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1653 05 19885285 19894640 Mibi05g1653 05 19885285 19894640 ECH