Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1644 ATGCCACAGAGAGAAATTTGCAATTCTGTTACAGAACCACGCCATGTGGTTAGGAAGTTCTTAGCCAGGCCTCAGCATGAAGGTGTTGGTGCCATTGTTAGAAGAAGCATTGGACGGTTTGAGCTGAAGTACTTTGATCCATTCCTTGTACTGGATGAATTCTCGGTCACTGCCCCAGCTGGATTTCCTGATCATCCACATAGAGGATTTGAGACTGTCACGTACATGTTGCAGGGAGCAGTGACGCATGAAGATTTTGAAGGACACAAAGGAACAATAGAAACCGGTGATTTGCAGTGGATGACTGCAGGAAGAGGCATAGTCCACTCAGAGATGCCTGCTTCTCAAGGCACCCAAAAGGGCCTACAACTTTGGATTAACCTCTCTTCCAAATATAAAATGATTGAGCCAAGGTATCAAGAGATGCCGAGTAAGGACATAGCAGAAGCTTCAAAAGATGGAATAAAAGTGAGAGTAATAGCTGGTGAAGCCTTAGGAATAAAGTCTCCTATCCAAACAAAGACTCCAACAATGTACTTAGACTTCAATCTCAAACCAGGGTCCCACTTGCAACAACCCATACCAGATTCATGGAATGCCTTTGTTTATGTGTTGGAAGGAGAGGGCGTGTTTGGCAGCCCTAAATCTCAGCCAGTGACTTCCCATCACATTCTTCTTCTTGGTTCTTCTGGGGATGGCTTGGAGGTTTGGAATAGGTCTGGTAGTAAGGCGGTTCGGTTCATTTTGGTTGGGGGTGAACCGTTGGGTGAACCTCTGGTCCAGTTTGGACCCTTTGTGATGAACACTCAAGAGGAGATTGATCAAACTGTGAGTGATTTTGAGAATTGTGTTAATGGGTTTGAGAAAGCTAGACATTGGAGATCTGAAGCTGCAATTGGTCTTGATTATTAA 912 0.4463 MPQREICNSVTEPRHVVRKFLARPQHEGVGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIETGDLQWMTAGRGIVHSEMPASQGTQKGLQLWINLSSKYKMIEPRYQEMPSKDIAEASKDGIKVRVIAGEALGIKSPIQTKTPTMYLDFNLKPGSHLQQPIPDSWNAFVYVLEGEGVFGSPKSQPVTSHHILLLGSSGDGLEVWNRSGSKAVRFILVGGEPLGEPLVQFGPFVMNTQEEIDQTVSDFENCVNGFEKARHWRSEAAIGLDY 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1644 303 CDD cupin_pirin_C 176 254 - -
Mibi05g1644 303 FunFam pirin 27 163 - -
Mibi05g1644 303 CDD cupin_pirin_N 33 128 - -
Mibi05g1644 303 Pfam Pirin 34 126 IPR003829 -
Mibi05g1644 303 PANTHER PIRIN-RELATED 8 297 IPR012093 -
Mibi05g1644 303 Gene3D Jelly Rolls 148 255 IPR014710 -
Mibi05g1644 303 SUPERFAMILY RmlC-like cupins 14 295 IPR011051 -
Mibi05g1644 303 Gene3D Jelly Rolls 27 281 IPR014710 -
Mibi05g1644 303 Pfam Pirin C-terminal cupin domain 179 285 IPR008778 -
Mibi05g1644 303 PIRSF Pirin 12 294 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1644 Mibi-ChrMibi05 19783503 19788131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1644 8 291 Calmodulin-binding Proteins AT3G59220 57.193 1.26e-122 351