Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1613 ATGGCCAAAAATGATCGCCGTTTTGTAGAATGGAAGGAGCAGTTTATTTCGCAGGAGCGTGGCAACCGTGTCGTTCACTATTACCTGAAAGATTCTGCTGGGGATTCTATACTTGCTGTTGTGGGCACTGAGAGGAGCCTGAGACACATGTTTTATGTTGTTGCTGATGAATTTCTTGAAGTTTGTGGGAAAGATGGTGCCACCCAAGCTGGTTTTAAATGGAGGTCCAGAAGAGAGGTGGTCGATTGGTTGACATCAATGCTATCAAAGCAGCATCAGCTGGGCGATAAGAGTGGGCTGCCAAGTCATAACTTGACACAAGTTCATGAGACCACAAATAGAAGTCTCAAAGAATTTATTGATCTGCATACACAGATATCAGATAAGGGCCTTCTAATGAGCAGCTTCAAAGGACACAGTTCTGACATTGTTTGGTCGGGTGTGGCCTGGACATGTGGCAAACAACTTAAACATTACCCCACATTCTACAGGAATGGGATCAAAATAGCAATTCAATCTTTCGTTTTTGTCATGGCAACGGGAGAGAATCATTATATTGCATATCTGGAGGACATGTATGAAGACAGGAGGGGTCAGAAGAAGGTTAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAGTTCCTGTCAGAAATCCTCACCCTCAAGAAATTTTCATCACATCTTATTCTCAAGTAATCAGTGCTGAGTGCGTTGATGGCCCTGCCACAGTTTTAACTCGGGAACATTATGAGAAACTCTTGCCTGCTTTTTCTCCTGTCTCATCAAATAGAATCCACTTGTGCTTTAGGCAATTCAGAAATAACAAAGTGAAGGCGTTTGACTTGAGTAAATTGCGTGGCTACCGTGATCAACCAATTCTCTCTTGCTTGAATCTTGATTCCTTCCAAAACCCTAAATGTAATAACCTTGCTGAAGAAGATGAAGAGTTGAGCCTGGGTGATGATGTAAGGCCTGAAGGTAAGAGGAGCAAAAGAGGTAGAGGGTCTTCTCAGCATTTGGTAGATCACGAAAGAGTTAGGAAATTAAGTAGAAGTCAGCAAATGGTGGACAAAACCATCGAGAATGTGGATTATGCTAGGTCAGATAGGAAATTGCTTTCCCGGAAACAGGTTGGTAATCAGCCCTGGTATAACTCCAAATACAAGGTTGATGACAAGATAGAGTTACTCTGTCAAGACAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTGCAAATATCCCGGAAACAGATAAAAGTTCAATACGTTGATGTGCAGGATGAAGATGGAGGCGGCAATCTTGAGGAATGGATCCCTGCTTTCAAACTTGCCCTGCCTGATAAACTTGGGATGAGACATTCTGGCCGGCCCACCATCAGGCCGGCCCCAACTAATGAGGGGCAACAAGAACTGGCTGTGGAGATTGGAACTGCAGTAGATGCATGGTGGAGTGATGGTTGGTGGGAGGGAGTTGTAAGTGGAATTGACGACAGTGATGATAATGTGCAAGTTTACTTTCCGGGTGAAGGTCTGTTCCGGAAAGTGTGCAAGAAGGATCTAAGAGTATCAAGAGATTGGCTGGGTGACCGATGGGTTGATATTGAGCTAAAGCCTAATGTAGCCTCAACGATATTTGCAGTTAATAGCTCTAACACAAAGATTTCAGTGACCCCATCTATTACTAAAGATGTTGACTCTTCTGGGGTTGTTATTTCATGTCAAGATGTTCCTATTAGTGAGAAGTCTAATGAGCTGAATGATGTTGCTGAAGATATGAATCAGGTTATTGATAACAAGCCCCCTTCACAAGAAGAGACAAGTACTGAAGTTGTCGAGACCGAGCAACATGGAAGTTGTGATAACAAAGATAACCATGAAGATGATGACAAAGACAATAAGGGAGACAACGATGGCAATGGTAACAAAAGGGTCGATAATGATGTGAGGGATATGGAGGTGTATGGGACTTCTGGGGAAGACTCCAAAGCTGTGGAACCCATGGAAGTGGCTGTTTAA 2031 0.4357 MAKNDRRFVEWKEQFISQERGNRVVHYYLKDSAGDSILAVVGTERSLRHMFYVVADEFLEVCGKDGATQAGFKWRSRREVVDWLTSMLSKQHQLGDKSGLPSHNLTQVHETTNRSLKEFIDLHTQISDKGLLMSSFKGHSSDIVWSGVAWTCGKQLKHYPTFYRNGIKIAIQSFVFVMATGENHYIAYLEDMYEDRRGQKKVKVRWFHHNQEVKGVVPVRNPHPQEIFITSYSQVISAECVDGPATVLTREHYEKLLPAFSPVSSNRIHLCFRQFRNNKVKAFDLSKLRGYRDQPILSCLNLDSFQNPKCNNLAEEDEELSLGDDVRPEGKRSKRGRGSSQHLVDHERVRKLSRSQQMVDKTIENVDYARSDRKLLSRKQVGNQPWYNSKYKVDDKIELLCQDSGIRGCWFRCTVVQISRKQIKVQYVDVQDEDGGGNLEEWIPAFKLALPDKLGMRHSGRPTIRPAPTNEGQQELAVEIGTAVDAWWSDGWWEGVVSGIDDSDDNVQVYFPGEGLFRKVCKKDLRVSRDWLGDRWVDIELKPNVASTIFAVNSSNTKISVTPSITKDVDSSGVVISCQDVPISEKSNELNDVAEDMNQVIDNKPPSQEETSTEVVETEQHGSCDNKDNHEDDDKDNKGDNDGNGNKRVDNDVRDMEVYGTSGEDSKAVEPMEVAV 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1613 676 Pfam BAH domain 170 259 IPR001025 GO:0003682
Mibi05g1613 676 SMART agenet_At_2 476 533 IPR014002 -
Mibi05g1613 676 SMART agenet_At_2 389 454 IPR014002 -
Mibi05g1613 676 Pfam Agenet domain 394 468 IPR008395 -
Mibi05g1613 676 ProSiteProfiles BAH domain profile. 167 286 IPR001025 GO:0003682
Mibi05g1613 676 MobiDBLite consensus disorder prediction 324 345 - -
Mibi05g1613 676 MobiDBLite consensus disorder prediction 317 345 - -
Mibi05g1613 676 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 388 625 - -
Mibi05g1613 676 Coils Coil 583 603 - -
Mibi05g1613 676 MobiDBLite consensus disorder prediction 602 676 - -
Mibi05g1613 676 Gene3D - 136 300 IPR043151 -
Mibi05g1613 676 MobiDBLite consensus disorder prediction 614 661 - -
Mibi05g1613 676 SMART BAH_4 167 287 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1613 Mibi-ChrMibi05 19422534 19426021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1613 403 531 PHD Transcription Factor Family AT5G58610 28.030 6.84e-11 63.9