Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1612 ATGGGGTTATCTAAAGTTTCCATCTTTGTTTTCTGGGCATGTCTTCAGTTGAATTTAGCACAAGTTCTCTCATCCTACATTAGCTGGAAGGATTTTTGGGTTGATGATCAGAGGTTGACCAGGGACCCCATTGAAAATGCTCGAGTTATTGTCGTTGACCATCATGGCAGAGGACATTCTAGGACTGTACAAGGAGCTGTAGATATGGTTCCTGATCACAACCCAGAAAGAATCAAAATTTACATACACCCAGGAATTTACAGAGAGAAAGTGTATGTGCCAAGAACGAAAGGGTATATATCGATGATAGGAGGAGGAAATGGAATAGGGAGTGTGGTGATTACGTGGAACAGTAAATCATCGGACAGAGGTTTTGATCGACAAGAACTTGGGACCTATGCTTCTGCAACTTTCACTGTAGAATCCGATTATTTCTGTGCAACCGGGCTGACTTTTGAGAACTCGGTAGTGGCGGTGAATGGAAGAAATGGGATGCAAGGAGTGGCACTAAGGGTGGACAGTGAAAGGGCCATGTTTTATAGGGTGAGGATCAAAGGGGAACAAGACACTCTGTTGGACAACACAGGCACTCATTATTTCTATCAGTGTCAAATCCAAGGCAAAATTGATTTCATATTTGGCAACGCAAAATCACTCTATCAGGACTGTGATGTTCATTCAATAGCAGAGACAGATGGAGCAATAGCAGCACATCACAGGAATGCAGAAGATGAAGACACAGGCTTCTCCTTTGTAAATTGCTCTATCACAGGCACTGGTTGTGTCTACCTTGGCAGAGCCTGGGGTGACTATTCCAGAGTCATCTACTCTCTCTGCTATATGGATGATATCATCATCCCTAAAGGCTGGACTGACTGGAACCACACATCCAGACAGAAGACTGCTATGTTTGGGGAGTATCAGTGTGAGGGAGTTGGAGCAGATAGAAGCAGAAGGGTGAAATGGTCAAAATATTTGAGCAATGAGGAAGCAACGCCTTTTCTGGATAAGAGTTTCATAAATGGGGACCAGTGGCTTAAGCTATAG 1047 0.4374 MGLSKVSIFVFWACLQLNLAQVLSSYISWKDFWVDDQRLTRDPIENARVIVVDHHGRGHSRTVQGAVDMVPDHNPERIKIYIHPGIYREKVYVPRTKGYISMIGGGNGIGSVVITWNSKSSDRGFDRQELGTYASATFTVESDYFCATGLTFENSVVAVNGRNGMQGVALRVDSERAMFYRVRIKGEQDTLLDNTGTHYFYQCQIQGKIDFIFGNAKSLYQDCDVHSIAETDGAIAAHHRNAEDEDTGFSFVNCSITGTGCVYLGRAWGDYSRVIYSLCYMDDIIIPKGWTDWNHTSRQKTAMFGEYQCEGVGADRSRRVKWSKYLSNEEATPFLDKSFINGDQWLKL 348
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1612 348 Gene3D - 48 348 IPR012334 -
Mibi05g1612 348 FunFam Pectinesterase 45 348 - -
Mibi05g1612 348 Pfam Pectinesterase 50 343 IPR000070 GO:0030599|GO:0042545
Mibi05g1612 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 44 347 - -
Mibi05g1612 348 SUPERFAMILY Pectin lyase-like 47 347 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi05g1612 Mibi-ChrMibi05 19416526 19418568 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1612 15 300 Carbohydrate Esterase AT5G55590 58.170 9.75e-125 360