Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1609 ATGGGGTTATCTAAAGTTTCAATTTTTGTTTTCTGGGCATGTGTTCAGTTGAATTTAGCACAAGTTCTCTCATCCTACATTAGCTGGAAGGATTTTTGGGTTGATGATCAAAGGTTGACCAGGGACCCCAGTGAAAATGCTCGAGTTATTGTCGTTGACCATCATAGCAGAGGACATTCTAGGACTGTACAAGGAGCTGTAGATATGGTTCCTGATCACAACCCAGAAAGAATCAAAATTTACATATACCCAGGAGTTTACAGAGAGAGAGTGTATGTGCCAAGAACGAAAGGGTATATATCGATGATAGGAGGAGGAAATGGAATAGGGAGTGTGGTGATTACGTGGAACAGTAAATCATCGGACAGAGGTTTTGATGGACAAGAACTTGGGACCTATGCTTCTGCAACTTTCACTGTAGAATCCGATTATTTCTGTGCAACCGGGCTCACTTTTGAGAACTCGGTAGTGGCGGTGAATGGAGGAGATGGGATGCAAGGAGTGGCACTGAGGGTGGACAGTGAAAGGGCCATGTTTTATAGGGTGAGGATCAAAGGGGAACAAGACACTCTGCTGGACAACACAGGCACTCATTATTTCTATCAGTGTCAAATCCAAGGCAAAATTGATTTCATATTTGGCAACGCAAAATCACTCTATCAGGAGTGTGATGTTCATTCAATAGCAGAGACACATGGAGCAATAGCAGCACATCACAGGAATGCAGAAGATGAAGACACAGGCTTCTCCTTTGTAAATTGCTCCATCACAGGCACTGGTTGTGTCTACCTTGGCAGAGCCTGGGGTGACTATTCTAGAGTCATCTACTCTCTCTGCTATATGGATGATATCATCATCCCTGAAGGCTGGACTGACTGGAACCACACATCCAGACAGAAGACGGCCGTGTTTGGAGAGTATCAGTGTGAGGGAGTTGGAGCAGATAGAAGCAGAAGGGTGAAATGGTCAAAATCTTTGAGCAATGAGGAAGCAACGCCTTTCCTGGATAAGAGTTTCATAAATGGGGACCAGTGGCTTAAACTATAG 1047 0.4432 MGLSKVSIFVFWACVQLNLAQVLSSYISWKDFWVDDQRLTRDPSENARVIVVDHHSRGHSRTVQGAVDMVPDHNPERIKIYIYPGVYRERVYVPRTKGYISMIGGGNGIGSVVITWNSKSSDRGFDGQELGTYASATFTVESDYFCATGLTFENSVVAVNGGDGMQGVALRVDSERAMFYRVRIKGEQDTLLDNTGTHYFYQCQIQGKIDFIFGNAKSLYQECDVHSIAETHGAIAAHHRNAEDEDTGFSFVNCSITGTGCVYLGRAWGDYSRVIYSLCYMDDIIIPEGWTDWNHTSRQKTAVFGEYQCEGVGADRSRRVKWSKSLSNEEATPFLDKSFINGDQWLKL 348
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1609 348 SUPERFAMILY Pectin lyase-like 47 347 IPR011050 -
Mibi05g1609 348 FunFam Pectinesterase 45 348 - -
Mibi05g1609 348 Pfam Pectinesterase 50 343 IPR000070 GO:0030599|GO:0042545
Mibi05g1609 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 44 347 - -
Mibi05g1609 348 Gene3D - 44 348 IPR012334 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi05g1609 Mibi-ChrMibi05 19374726 19376763 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1609 15 300 Carbohydrate Esterase AT5G55590 57.190 1.03e-124 360