Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1589 ATGGAAGGTTCAAGAGGTCCCTTCTTTCCCTCTGGTCGCTACCACCATCACCAACCTCCAACCTCTGCCAGAAACGTTTTTCTTTCCCACCGATCAAAGAATCTTTTGTCTTATCTATCTTCTTCTTCTTCTTATCTGTGTCATCTCACTCATGATCTGTGCATATACGGAATATTACAGAAATCTGACAATCCAATTGTTTTGTTAGACGTTCAAGCTCTGAATCTCTCAGCCGCAGCATCAAACCCAGCCGTATACGGCGGAGCTCCGGCGAACCCAAACCAGGATCAGCCACAACAACAACCACAGCAACCACCACCAGCACTACAGCGAGTTATGATAACAAGAGAACAAGACCAATACATGCCAATAGCCAACGTAATCAGAATCATGCGACGTATGCTTCCGTCGCACGCAAAGATATCCGACGAGGCCAAAGAGACAGTCCAAGAATGTGTCTCTGAGTTCATAAGCTTCATCACCAGTGAAGCCAACCAGAAGTGCCAGCAGGAACAACGTAAGACGGTGACGGCGGATGACTTGCTTTGGGCTATGGAGAAGCTTGGCTTTGATGACTATGTGGGCCCCCTCTCTCTCTTCCTCCACCGTTACCGTGACGGTAACCGTGGCTCTGTTCCCTCCCCCGGTGCCGGCTACTACTCCCCGCGGGCCCCACCGCCTCCGGAGATGCCGGTGCCACCTCAGCAGCCGCCGCCGCCGCCGTATTTTTATGAGTATCCGGTGGGGATGAATTATCAGATGGGGTCGGGTGTAGGCAGCTCTAGCGGCGGCTCTGGCAGTAGTGGCGGTGGCGGTGGTGGTGCTCCGGCGTATTATGATCCTTACGGTTATCTGAGGAATGATCGTTTCTGA 873 0.5223 MEGSRGPFFPSGRYHHHQPPTSARNVFLSHRSKNLLSYLSSSSSYLCHLTHDLCIYGILQKSDNPIVLLDVQALNLSAAASNPAVYGGAPANPNQDQPQQQPQQPPPALQRVMITREQDQYMPIANVIRIMRRMLPSHAKISDEAKETVQECVSEFISFITSEANQKCQQEQRKTVTADDLLWAMEKLGFDDYVGPLSLFLHRYRDGNRGSVPSPGAGYYSPRAPPPPEMPVPPQQPPPPPYFYEYPVGMNYQMGSGVGSSSGGSGSSGGGGGGAPAYYDPYGYLRNDRF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1589 290 PRINTS CCAAT-binding transcription factor subunit A signature 187 205 - -
Mibi05g1589 290 PRINTS CCAAT-binding transcription factor subunit A signature 149 167 - -
Mibi05g1589 290 PRINTS CCAAT-binding transcription factor subunit A signature 168 186 - -
Mibi05g1589 290 MobiDBLite consensus disorder prediction 219 239 - -
Mibi05g1589 290 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 103 207 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mibi05g1589 290 FunFam Nuclear transcription factor Y subunit B-6 110 217 - -
Mibi05g1589 290 MobiDBLite consensus disorder prediction 85 107 - -
Mibi05g1589 290 MobiDBLite consensus disorder prediction 255 290 - -
Mibi05g1589 290 Gene3D Histone, subunit A 112 212 IPR009072 GO:0046982
Mibi05g1589 290 MobiDBLite consensus disorder prediction 211 239 - -
Mibi05g1589 290 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 122 185 IPR003958 -
Mibi05g1589 290 MobiDBLite consensus disorder prediction 1 20 - -
Mibi05g1589 290 SUPERFAMILY Histone-fold 118 247 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1589 Mibi-ChrMibi05 18818533 18820915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1589 101 217 CCAAT-HAP3 Transcription Factor Family AT5G47670 64.706 3.64e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mibi05g1589 CBFD_NFYB_HMF 1.5e-25 CL0012