Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1566 ATGGAAATCAGGAGGGAGGATGAAGAAGGTGGTGATTCTCAAGAGGTTTCACTGCAGATTGCAGCAGCAAGCCATAGCTTTGGTCACAGCATAGAGTTGATGCCTCAGCCTAATTACCTTATCAATAGTAATAATAACAGCAGGTTCTCTCAGATTGACATTCCCATTAACCATTCCACTCTAAATCGGAATCCTCCTGTCCCCATATTTCTCAAGTTTGAGGATGTAGAGTACAAAGTGAAGAACAGCCGTGCAGGGTCCATCATGAAGAAAACAGTGTCAAAGGTGGCCACACAAGTCAGTGAAAGCCAAGACAGATACATAAAAATCCTGAAGGGTATAACTGGAAGCATAGGTCCTGGTGAGATCCTTGCTCTCATGGGTCCTTCTGGTAGTGGCAAGACTACCTTGTTGAAAGTCATAGGAGGAAGATTAACTGACAATGTCAAAGGAAAAGTCACTTACAATGATGTTCGATACAGTTCTGCCATCAAGAGAAGAATTGGATTTGTGACACAAGATGATGTTCTGTTCCCTGAACTAACAGTGGAAGAAACATTAGTCTTCTCTGCACTCTTAAGGTTGCCATCCAATATGAGCAAACAACAAAAATATCAGAGAGTGGAGGCAACTCTAAAGGATCTAGGCCTTGAAAGATGTCGGCACACAAAAATAAAAGGTATTTCAGGAGGTGAAAGGAAGAGAACCAGCATAGGACATGAGATTCTTGTGGATCCTTCATTGCTTCTACTTGATGAGCCAACCTCAGGCCTTGATTCCTCTTCAGCAAATAGACTCCTCCTCACCCTCGATGGACTTGCCAAGGCTGGAAGGACAATAATCACAACAATTCACCAGCCATCCAGCAGGATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAGGGCTATCCAATTTATTATGGGAAGGGTAGAGATTCAATGGACTACTTCTCATCCTTGAGGTTCATCCCAGACATACCCATGAATCCTGCAGAGTTTTTGATTGACTTGGCCACTGGACAAGTCAATGACATAAGCATTCCAGAGGACGTTTTGGAACATCAAGAATCTGATGACCCTTCAAGATCTGTCATAAAACATCTACAACTCAAGTACAAGACTTTATTAGAGCCAAAGGAGAAAGAAGAGAACCATGGAGCAATGAAGGCACCAGAACATCTACAAGCAGCCATTCAAGCTAAGAAGGAGTGGGCTATGAGCTGGATAGACCAGTTCAAGATTCTGTCAAAGAGAACATTCAAGGTAAGATGCAAAGACTACTTTGATCAGGTCAGAATAATTCAAGCACTTGGAGTTGCAATCTTGCTGGGCCTTCTTTGGTGGAAATCTTCAACCCATACAGAGGCTCAACTCAGAGATCAGGTGGGGTTAATGTTCTATATCTGTATATTCTGGACATCTTCGTGTATCTTTGGAGCAGTCTATGTGTTTCCATTTGAGAAGACAAATTTGGTGAAAGAAAGGAAAGCAGACATGTACAGATTAAGCGTCTACTATGCATGTAGCACTCTGAGTGATATGATAGCTCATGTGTTCTACCCTACTTTCTTCATGTTTATCTTGTATTTCATGGCTGGCTTCAAGAGAACTGTCACTGCCTTCTCCCTCACACTACTCTCTATGCTTCTGATAGCCGTTACCAGTCAAGGAGCAGGAGAACTATTTGGAGCTTCAGTTATGAGTATCCAAAGATCTGGCATGATTGCTTCTTTGATCCTAATGCTATTCCTTCTAACTGGTGGCTATTATGTCCAGCACATACCAGTATTCATGAAATGGTTAAAGTATATGTCGTTCATGTACTATGGGTTCAGGCTTCTGTTAAAAGTGCAGTACTCAGGAGATGATCTTTATGAGTGTGGAAGTTTTGGAGGGTGCAGGCCTCTTCAGAGCTCTCCTTCGTTTGACACAGTGAACTTGGAAGGAGGTTTGAAAGAAGCTTTGGTTCTTCTTGCCATGGCTCTCATCTTTCGTCTCTTTGCTTACTTGTGCCTCCGCGCCAGAATTGATTCCTCCAACCTCTGA 2052 0.4254 MEIRREDEEGGDSQEVSLQIAAASHSFGHSIELMPQPNYLINSNNNSRFSQIDIPINHSTLNRNPPVPIFLKFEDVEYKVKNSRAGSIMKKTVSKVATQVSESQDRYIKILKGITGSIGPGEILALMGPSGSGKTTLLKVIGGRLTDNVKGKVTYNDVRYSSAIKRRIGFVTQDDVLFPELTVEETLVFSALLRLPSNMSKQQKYQRVEATLKDLGLERCRHTKIKGISGGERKRTSIGHEILVDPSLLLLDEPTSGLDSSSANRLLLTLDGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKGRDSMDYFSSLRFIPDIPMNPAEFLIDLATGQVNDISIPEDVLEHQESDDPSRSVIKHLQLKYKTLLEPKEKEENHGAMKAPEHLQAAIQAKKEWAMSWIDQFKILSKRTFKVRCKDYFDQVRIIQALGVAILLGLLWWKSSTHTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKTNLVKERKADMYRLSVYYACSTLSDMIAHVFYPTFFMFILYFMAGFKRTVTAFSLTLLSMLLIAVTSQGAGELFGASVMSIQRSGMIASLILMLFLLTGGYYVQHIPVFMKWLKYMSFMYYGFRLLLKVQYSGDDLYECGSFGGCRPLQSSPSFDTVNLEGGLKEALVLLAMALIFRLFAYLCLRARIDSSNL 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1566 683 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 88 328 IPR003439 GO:0005524
Mibi05g1566 683 Pfam ABC-2 type transporter 413 621 IPR013525 GO:0016020|GO:0140359
Mibi05g1566 683 Pfam ABC transporter 111 256 IPR003439 GO:0005524
Mibi05g1566 683 Gene3D - 78 323 IPR027417 -
Mibi05g1566 683 SMART AAA_5 120 306 IPR003593 -
Mibi05g1566 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 671 - -
Mibi05g1566 683 FunFam ABC transporter G family member 22 98 322 - -
Mibi05g1566 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 320 IPR027417 -
Mibi05g1566 683 CDD ABCG_EPDR 68 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1566 Mibi-ChrMibi05 18438591 18442979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1566 108 289 Calmodulin-binding Proteins AT2G36910 30.729 2.45e-12 68.6