Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1562 ATGAAGCTATTAGCATTTGAATTGTTGTTTTTATCTCTAGTGGCCATAGCCACGGCCACCACTACCTTAGACGATTATGTTCATTGGCCAACTGGAAATTTCATTCAATGGACAGACTTGACATTGATCCAAAATGATACAATTATCATAGTTGACCAAAGTGGGGTCGGAAATTCAACAACCATTCAAGGAGCTGTGGATTTGGTCCCCGTTAACAACCCATCACGAATGAAAATCGTCATCAATCATGGCATTTACAATGAAACAGTGGTAATACCACAGAACAAGCCAAACATATCAATGATTGGGAGGCCAGATTTAGTGACCGGTGAACTTCCTGTGATCACGAGTTCTCGAAAAGCATCTGATACGGATCAAAATGGAAACATGCTGGGAACCATGAACACGGCAACCTTTTTTGTTCAATCGGATTATTTTGTTGCTTCCTCTATTACCATCGAGAATAGAGCTACTCCATGTGGACATGGCCATCAGGCATTGGCTATAAGAATAGATGGAGATAGATCAGTGTTCCACAGAATGAGGTTCTTAGGCTATCAAGACACTATCATGGATACTACCGGTATTCATTACTTTTATCATTGTTATATTGAAGGTAGTGTTGATTTCATCTGTGGAGGTGCAACCTCATTGTATCAGGATTGTACGATAAACTCAACAAGAGCAGGAGCAATAGCTGCACATGCGAGGAACAATCCTGATGACAATTCAGGTTTTATCTTTGCGGATTGCAAAATTCAAGGAGTTGGGCCAACTTTTCTTGGGAGAGCTTGGGGCAATTATTCTAAAATAATATATTCTTTTTGCACAATGGAAAATATTATCAACCCCCAAGGCTGGTATGATTGGGGCCAGGCTTATAAACAAAACACGTCATTTTTTGCCGAGTACATGAACGAAGGGCCTGGATCAAACATGACTGGAAGAGTTTCATGGTCAAAAACATTAACGGATGATCAAGCAGCAAGCTATGTTGGTAGAAACTTTATCAACGCAGATGGATGGCTTAGAATATAA 1038 0.4017 MKLLAFELLFLSLVAIATATTTLDDYVHWPTGNFIQWTDLTLIQNDTIIIVDQSGVGNSTTIQGAVDLVPVNNPSRMKIVINHGIYNETVVIPQNKPNISMIGRPDLVTGELPVITSSRKASDTDQNGNMLGTMNTATFFVQSDYFVASSITIENRATPCGHGHQALAIRIDGDRSVFHRMRFLGYQDTIMDTTGIHYFYHCYIEGSVDFICGGATSLYQDCTINSTRAGAIAAHARNNPDDNSGFIFADCKIQGVGPTFLGRAWGNYSKIIYSFCTMENIINPQGWYDWGQAYKQNTSFFAEYMNEGPGSNMTGRVSWSKTLTDDQAASYVGRNFINADGWLRI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1562 345 Gene3D - 43 345 IPR012334 -
Mibi05g1562 345 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 44 344 - -
Mibi05g1562 345 SUPERFAMILY Pectin lyase-like 46 344 IPR011050 -
Mibi05g1562 345 Pfam Pectinesterase 49 340 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1562 Mibi-ChrMibi05 18388148 18389794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1562 48 296 Carbohydrate Esterase AT5G55590 51.383 2.14e-84 257