Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1551 ATGAATCAGCGCCAGGGTTCTAATGCTGACACTAATTGCATCCATATCTCTAAGGCCAATAAACAGCCTGCCGCTGTGAGCCAAACTAATTCAACGTCATTGCCAGAAAAATATAAATCCGCTATATCTCTAATGGAGCCATCCTCTGGGGTTCATTTTTCTGGATTTCACATGAATGGTTCAGCAGAGAGGACTGCTGGCGCAGAGCAACCTACAACTTCAGCTAATGACATGTATAAACAACCTTTTGTGATAGGTGTTGCTGGGGGAGCTGCATCTGGGAAGACTACAGTTTGCGATTTGATTATTCAGCAGCTTCATGACCAACGAGTTGTGCTTGTTACTCAGGATTCTTTTTATCATAATTTGACTGAAGAGGAACTTATAAGAGTCCAAGATTACAACTTTGATCATCCTGATGCTTTTGATACTGAGGAATTATTACGGGTTATGGACAAGTTAAGGCGTGGACAAGCTGTAGATATTCCAAATTATGACTCAAAGAGTTACAAGAGTGACGTGTTTCCATCAAGAAGGGTGAATCCTTCAGATGTTATAATTTTGGAAGGAATTCTTATTTTCCATGATCCTCGTCTTCGGGAGCTGATGAATATGAAGATCTTTGTTGACACAGATGCTGATGTTCGTTTGGCTAGGAGAATTAGGCGTGATACTTGTGAGAAGGCTCGGGATATTGGCTTAGTGCTTGATCAGTATTCTAAATTTGTAAAGCCGGCTTTTGATGACTTTATTCTTCCAACAAAGAAATATGCTGATATCATTATACCCCGTGGAGGAGATAATCATGTGGCCATTGACTTGATCGTACAGCATATCCGAACAAAGCTTGGTCAGCATGATTTGTGTAAAATATATCCTAATTTATATGTCATTCAAACAACTTTTCAGATAAGGGGTATGCACACCCTGATACGTGATTCTCAGACAACAAAACATGATTTTGTGTTTTATGCTGACCGTTTGATTCGTTTGGTTGTTGAACATGGCCTGGGGCATCTTCCATTTACAGAGAAACAAGTAATGACTCCAACTGAGTCTGTATATACTGGCGTGGATTTCTGCAAGAGGTTATGCGGTGTCTCTGTTATCAGGAGTGGAGAGAGTATGGAAAATGCTTTACGTGCATGCTGTAAAGGTATAAAGATTGGTAAAATTCTTATTCATAGAGAAGGCGACAATGGTCAGCAGTTAATTTATGAGAAGTTGCCTAACGATATCTCAGATAGACATGTGTTGCTATTGGATCCTATCCTAGGAACAGGTAATTCTGCTGTTGAAGCAATTTCTTTGCTTCTCAGAAAGGGTGTACCAGAGGCCAACATTATATTTCTCAACCTCATATCAGCACCTCAAGGTGTGCATGTGGTCTGCAAGAGATTTCCAAGAATTAAAATTGTGACATCTGAGATTGATTTTGGTTTGAATGATGATTATCGTGTTGTTCCTGGCATGGGTGAGTTTGGGGACCGTTATTTTGGAACAGATGATGATGATGAGCAACTGGTGTTGGCCCCTTTACAAGAGTGA 1548 0.4025 MNQRQGSNADTNCIHISKANKQPAAVSQTNSTSLPEKYKSAISLMEPSSGVHFSGFHMNGSAERTAGAEQPTTSANDMYKQPFVIGVAGGAASGKTTVCDLIIQQLHDQRVVLVTQDSFYHNLTEEELIRVQDYNFDHPDAFDTEELLRVMDKLRRGQAVDIPNYDSKSYKSDVFPSRRVNPSDVIILEGILIFHDPRLRELMNMKIFVDTDADVRLARRIRRDTCEKARDIGLVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQTTFQIRGMHTLIRDSQTTKHDFVFYADRLIRLVVEHGLGHLPFTEKQVMTPTESVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVEAISLLLRKGVPEANIIFLNLISAPQGVHVVCKRFPRIKIVTSEIDFGLNDDYRVVPGMGEFGDRYFGTDDDDEQLVLAPLQE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1551 515 PRINTS Uridine kinase signature 250 263 - -
Mibi05g1551 515 PRINTS Uridine kinase signature 112 123 - -
Mibi05g1551 515 PRINTS Uridine kinase signature 82 99 - -
Mibi05g1551 515 PRINTS Uridine kinase signature 157 172 - -
Mibi05g1551 515 PRINTS Uridine kinase signature 214 224 - -
Mibi05g1551 515 PRINTS Uridine kinase signature 228 239 - -
Mibi05g1551 515 FunFam Uridine kinase 79 285 - -
Mibi05g1551 515 Gene3D - 78 285 IPR027417 -
Mibi05g1551 515 TIGRFAM udk: uridine kinase 81 282 IPR000764 -
Mibi05g1551 515 CDD PRTases_typeI 359 474 IPR000836 -
Mibi05g1551 515 Pfam Phosphoribulokinase / Uridine kinase family 84 270 IPR006083 GO:0005524|GO:0016301
Mibi05g1551 515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 275 IPR027417 -
Mibi05g1551 515 CDD UMPK 84 282 IPR000764 -
Mibi05g1551 515 Pfam Uracil phosphoribosyltransferase 300 501 - -
Mibi05g1551 515 PANTHER URIDINE KINASE 72 411 - -
Mibi05g1551 515 FunFam Uridine kinase 286 501 - -
Mibi05g1551 515 Gene3D - 286 501 IPR029057 -
Mibi05g1551 515 SUPERFAMILY PRTase-like 285 502 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1551 Mibi-ChrMibi05 18266873 18274443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1551 39 504 PRT Gene Family AT4G26510 82.906 0.0 808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1551 05 18266873 18274443 Mibi08g0928 08 22164993 22175209 CCT