Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1543 ATGTTAACTAATTTAGCAGAAAAGGTCAAGAAAGCAGATAATGTCTCAAACGTGAGGCAAATCTATTGGTCCCCTAAAGTAGTCAACCTGGGAAAGCACGGAGAGTTTCTGTTGGAGGGTATCTTCGATTGCATCCATGAAATTACAGTGGCTCTTGCTTTTTCTGGTAGGATGAGCGATTCTGCTTATAGAGTTGAAACCACTTCACGTCTTGCTCAATGGAGAATCGAAAACCCTGCTTCCTGCACATACCGAAAGTCTGATCCTTTCAAGATCGGCAAGTGGAATTGGCATTTGGCAGTGGAGAAGAACAGGGTTTTGTTTATAAAATTATATCCAGAAATATCGAATCTAACCAGAGATAACCCCCCGATTGCATCTTTCATCATTCGGGTGGTTAGTTCAGCTGCAGATCGCAAGGCCTTGGCCCACCCAGTAGTAAAAGACAAATTGATCAAGAATAGCGAAGACTTTGTTTGGGCACTTGAGGTTCCAGTAACTGGGAAATTCATTATTGACCTCGAGTTCCTTGATTTGAAGACAGCATCCCCAAACGGTGGAGAACCTTGCTCCATCTGGTCAGAAGGACTTACACCGAAGGCCTCTAATGCAACAGCTCTTGAAGTTCTTGGTCGGATGCTAACTGAAGGAATCCACACTGATATAGTTATCAATGCATCTGATGGAAGTATCGGTGCTCATCGAGCTGTTCTTGCGGCTCGATCTCCTGTCTTCCGCAGCATGTTCTCGCATAATTTAAAGGAGAAGGAGCTATCAACCATAAACATTGAAGACATGTCCATTGATGCTTGCCAGGCATTCCTCAATTATCTTTATGGTAGTATAAAAACTGAAGAATTTCTCACACACAGGCTTGTCCTTCTTCATGCTGCTGACAAGTATGACATATCTGACCTGAAAGAGGCATGCCATGAAAGCCTTGTAGAAGATATTGATACCAAAAATGTTCTTGAGAGGCTCCAAAATGCATCCCTGTACCAATTACCAAAACTAAAGAGCAGCTGTCTACGATATCTTGTAAAATTTGGAAAATTATTTGACATTCGTGACGATTTCAACTCCTTCCTGCAATGTGCAGATAGGGATCTGATAACTGAAGTCTTCCATGAAATTCTCAATGCCTGGAGAGGGTTCTGA 1158 0.424 MLTNLAEKVKKADNVSNVRQIYWSPKVVNLGKHGEFLLEGIFDCIHEITVALAFSGRMSDSAYRVETTSRLAQWRIENPASCTYRKSDPFKIGKWNWHLAVEKNRVLFIKLYPEISNLTRDNPPIASFIIRVVSSAADRKALAHPVVKDKLIKNSEDFVWALEVPVTGKFIIDLEFLDLKTASPNGGEPCSIWSEGLTPKASNATALEVLGRMLTEGIHTDIVINASDGSIGAHRAVLAARSPVFRSMFSHNLKEKELSTINIEDMSIDACQAFLNYLYGSIKTEEFLTHRLVLLHAADKYDISDLKEACHESLVEDIDTKNVLERLQNASLYQLPKLKSSCLRYLVKFGKLFDIRDDFNSFLQCADRDLITEVFHEILNAWRGF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1543 385 PANTHER OS08G0495500 PROTEIN-RELATED 62 384 IPR044714 -
Mibi05g1543 385 Pfam BTB/POZ domain 213 316 IPR000210 GO:0005515
Mibi05g1543 385 CDD BTB_POZ_ZBTB_KLHL-like 219 301 - -
Mibi05g1543 385 Gene3D Potassium Channel Kv1.1; Chain A 197 348 IPR011333 -
Mibi05g1543 385 SUPERFAMILY POZ domain 205 316 IPR011333 -
Mibi05g1543 385 ProSiteProfiles BTB domain profile. 220 279 IPR000210 GO:0005515
Mibi05g1543 385 SMART BTB_4 220 318 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1543 Mibi-ChrMibi05 18180142 18183019 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mibi05g1543 BTB 1.8e-23 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1543 05 18180142 18183019 Mibi08g0590 08 10574835 10578215 CCT
Mibi05g1543 05 18180142 18183019 Mibi05g1543 05 18180142 18183019 ECH