Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1541 ATGGCGCAACCCTCTGCTATTCAGTTTCTTCTATCAGTGTTTCTTTTGTCCACTTGCTGCCTGCAACCTATCCAGGCCATCAAGAAGACTTATATTGTGTACTTAGGGTCACATTCTCATGGCCTAAGTCCTACTTCTGCTGATCTTGATTCAGCCACAAATTCTCATTACAAAATGTTGGGATCACTCCTAGGAAGCCAAGCCAAAGCACAAGAATCATTAATTTATTCTTATAATAAAAACATCAATGGCTTTGCTGCTCAGCTTGAAGAGGAAGAAGCAAAAAAGCTTGCAAAGCATCCAAAAGTGGTGTCTGTGTTCTTGAGCCAAAGGCGGGAACTGCACACAACACATTCATGGCAGTTTCTTGGACTAGAGTCTAGTCAAGGAGTAGTTGATGAAGATTCTGCTTGGGCAAAGGCAAAATATGGTGAAGATACAATCATTGCTAATCTTGACACAGGACCAGAACCTGGAAGTGTGGCTAATTTGGCTCCATGGTTGTTAACTGTTGGTGCTAGCACATTAGATAGGAGCTTTGTTGACTACATAACTCTTGGTGACAAGAAGCACATAACGGGAGCAACTCTTTCATCCATGAAGTTGCCATCTCCAAAGTTCTATCCTCTGATTAGTTCTAAGGATGCCGGGCTTCCCCACGCGCAATCTGCTGATCTCTGCTTCAATGGAACCCTTGATCCTACAAAGGTGAAGGGGAAGATAGTGGTATGCCTCAGAGGTGAGAATGCAAGAACAGCGAAAGGCGTGGAAGCCGCTCGTGCAGGAGCAGTAGGGATGATCTTGGCCAATGATGCAGATAGCGCGGATAACACTATAGCAGACCCTCATGTTTTGCCTGCTTCAAACATCAATTATGAAGATGGACAATATCTCTTTAAGTACATCAACAAAACCAAGAACCCTGTGGCTTTCATGACTAGTGCCAAAACAGTTATACCAGTAAAGCCAGCTCCTGTCATGGCTTCATTCTCTTCAAGGGGACCCAACATGGTCCTACCTTCGATCCTCAAGCCTGATATTACTGCACCTGGGGTGAACATTATTGCTGCTTATTCAGAAGCCACAAGCCCAACTGAACAAGATTCCGATAAACGAAGAGTTCCTTTCACAGTGATGTCAGGAACTTCCATGTCTTGCCCTCATGTTTCTGGTGTTGCTGGCCTCCTCAAAACCCTCCATCCTGATTGGAGTCCTGCAGCCATCAGATCTGCAATCATGACCAGTGCGAGCACTATGGATGACACCGAAAAGTCAATTATGGACTCTAATAAGAAAGATGCAAACCCATTTGCTTATGGAGCAGGACATGTTCAACCTGATGAAGCTATGGATCCTGGGCTTATTTATGATCTCACAAATGATGATTACTTGAACTTCTTATGTGGTAATGGCTATAATGGAACACTTATTCAGCAATTTTTTACGGGAAAGCCCTTCACTTGTCCAAAGTCCACCAACCTGCTAGATTTTAACTACCCTTCAATCATGGTGCCTAGTTTGGGGACAAATACAGTAAATATTACTAGGACAGTGACACACGTGGCCGTTTGTCCTACCAAGTACTTTGTGGAGATTAAGGCTCCTGCGGGACTTAATATCTTTGTTGAGCCAAATCACTTGAAATTCAAAAAAGCAGGAGAGAAGAAGAGTTTCCAGGTTATGATTGAAGGAACTGGTACACACAGGCCTTCAACTTATTCTTTTGGAGAGATAAATTGGACAAATGGGATGAAGAATGTGAGAAGTCCTGTTGTGGTGCGCCACAAATAG 1791 0.4355 MAQPSAIQFLLSVFLLSTCCLQPIQAIKKTYIVYLGSHSHGLSPTSADLDSATNSHYKMLGSLLGSQAKAQESLIYSYNKNINGFAAQLEEEEAKKLAKHPKVVSVFLSQRRELHTTHSWQFLGLESSQGVVDEDSAWAKAKYGEDTIIANLDTGPEPGSVANLAPWLLTVGASTLDRSFVDYITLGDKKHITGATLSSMKLPSPKFYPLISSKDAGLPHAQSADLCFNGTLDPTKVKGKIVVCLRGENARTAKGVEAARAGAVGMILANDADSADNTIADPHVLPASNINYEDGQYLFKYINKTKNPVAFMTSAKTVIPVKPAPVMASFSSRGPNMVLPSILKPDITAPGVNIIAAYSEATSPTEQDSDKRRVPFTVMSGTSMSCPHVSGVAGLLKTLHPDWSPAAIRSAIMTSASTMDDTEKSIMDSNKKDANPFAYGAGHVQPDEAMDPGLIYDLTNDDYLNFLCGNGYNGTLIQQFFTGKPFTCPKSTNLLDFNYPSIMVPSLGTNTVNITRTVTHVAVCPTKYFVEIKAPAGLNIFVEPNHLKFKKAGEKKSFQVMIEGTGTHRPSTYSFGEINWTNGMKNVRSPVVVRHK 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1541 596 FunFam subtilisin-like protease SBT1.5 177 319 - -
Mibi05g1541 596 SUPERFAMILY Subtilisin-like 17 518 IPR036852 GO:0004252|GO:0006508
Mibi05g1541 596 Gene3D - 467 595 - -
Mibi05g1541 596 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 157 IPR045051 -
Mibi05g1541 596 Pfam Subtilase family 299 442 IPR000209 GO:0006508|GO:0008236
Mibi05g1541 596 Pfam PA domain 222 298 IPR003137 -
Mibi05g1541 596 ProSitePatterns Serine proteases, subtilase family, serine active site. 381 391 IPR023828 -
Mibi05g1541 596 ProSiteProfiles Serine proteases, subtilase domain profile. 1 450 - -
Mibi05g1541 596 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Mibi05g1541 596 PRINTS Subtilisin serine protease family (S8) signature 380 396 IPR015500 -
Mibi05g1541 596 Gene3D - 177 319 - -
Mibi05g1541 596 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Mibi05g1541 596 Gene3D Peptidase S8/S53 domain 154 463 IPR036852 GO:0004252|GO:0006508
Mibi05g1541 596 Pfam Fibronectin type-III domain 496 593 IPR041469 -
Mibi05g1541 596 FunFam Subtilisin-like protease SBT5.3 20 115 - -
Mibi05g1541 596 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 115 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1541 Mibi-ChrMibi05 18155150 18158999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1541 142 594 Subtilisin-like Serine Gene Family AT5G59810 52.967 1.51e-160 476