Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1538 ATGGCCGGAACCCTAAATCTTACTCTCTCCGCCGTGAGACCTCTCCGTTCATCTTCTTCCTCCGCCGCCGCCTCCTCCGTCAGGTTTCCTCCGTTTCAATGTAAAGCTTCGATGCGTTCTTTTACGGCTTCGACCGGATCTGCGGCGGCGGCATCTCGCCGTCCGGCGAGTCTGTATGAGGTTCTTCGAGTTAGCCAGAACGCTTCGCCTAGGGAAATAAAGTCGGCTTACCGGAGTTTGGCTAAGATCTATCATCCTGATTCGGCTTTGAACAGATCGGAATCTTCTTATGACGATGATCATGATTTCATCAAGATTCATAACGCCTATGCTACGCTCTCTGATCCTTCCGCTAGAGAGATTTATGATCTCTCTTTGATGGCCGTTCATGGCAGGAGGCGTCCTGTGGTTTCTATGTCTTCGGTTCAGAATTCGGCTTCTTCGGGGTTTTATACGACCCGGAGATGGGAGACAGATCAATGTTGGTAG 489 0.5072 MAGTLNLTLSAVRPLRSSSSSAAASSVRFPPFQCKASMRSFTASTGSAAAASRRPASLYEVLRVSQNASPREIKSAYRSLAKIYHPDSALNRSESSYDDDHDFIKIHNAYATLSDPSAREIYDLSLMAVHGRRRPVVSMSSVQNSASSGFYTTRRWETDQCW 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1538 162 ProSitePatterns Nt-dnaJ domain signature. 103 122 IPR018253 -
Mibi05g1538 162 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 9 162 - -
Mibi05g1538 162 Gene3D DnaJ domain 42 144 IPR036869 -
Mibi05g1538 162 SUPERFAMILY Chaperone J-domain 21 122 IPR036869 -
Mibi05g1538 162 CDD DnaJ 59 115 IPR001623 -
Mibi05g1538 162 Pfam DnaJ domain 58 123 IPR001623 -
Mibi05g1538 162 PRINTS DnaJ domain signature 98 118 IPR001623 -
Mibi05g1538 162 PRINTS DnaJ domain signature 77 92 IPR001623 -
Mibi05g1538 162 PRINTS DnaJ domain signature 59 77 IPR001623 -
Mibi05g1538 162 SMART dnaj_3 56 118 IPR001623 -
Mibi05g1538 162 ProSiteProfiles dnaJ domain profile. 57 126 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1538 Mibi-ChrMibi05 18103931 18104419 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1538 59 123 C2H2 Transcription Factor Family AT1G74250 42.424 8.25e-08 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1538 05 18103931 18104419 Mibi05g1538 05 18103931 18104419 ECH