Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1531 ATGTGTTTTGGCTTTTTGATTCTTAATAGGAAATACGAAAAGGAAGAGCAAATTGTCAAATTGATGGGCATTAATTGTGCAATCTTTTTTATATATGATTTTCTTCATAATATATCAGCAATTCACAAATCCTCGAAGTCCAAGGCAATTCAATCACCATGGATATTAACACTTATGGATAAGGAAAAGCTATCTACCTGCTGTAATGTGCTCGATTTTAGTTTACCCAAATCAAAACGAAAAGGCATCAGAACAGAAAATTGCCTCAAGGACGATGACAAGAGGAGCACGTGGAGGAAGATCTATGGCCTCGTGTGGGAGAGAAGAGGAGGAGGTAATCTACCAAGCAGAGGGAATTCTCACTTCCCCCATTATTCTAGAGAAATAGAAAACTTGATACAGTACAGAGACATGGGCCGTATTCCATGCTGCGAGAAGGACAGTGTTAAAAGAGGACAATGGACACCTGAGGAAGACAACAAGCTTTCTTCCTACATTGCTCAACATGGCACCAGGAATTGGCGCCTCATTCCTAAGAATGCTGGCCTCCAGAGGTGTGGCAAGAGCTGTAGGCTTAGGTGGACTAACTACCTTCGTCCTGATCTCAAGCATGGTCAGTTTTCAGACGCAGAAGAGCAAACCATTGTGAAGCTTCACTCTGTTTTTGGTAACAGATGGTCACTAATAGCAGCTCAGCTGCCGGGCCGCACTGATAATGATGTCAAAAACCACTGGAACACCAAGCTGAAGAAGAAACTTTCAGGCATGGGGATTGACCCTGTCACACACAAGCCATTCTCCCACCTGATGGCCGAAATTGCAACAACATTGGCACCCCCCCAGGCAGCTCACCTGGCTGAAGCAGCTCTGGGCTGCTTCAAAGATGAGGTGCTTCATCTTCTTACTAAGAAGAAGATTAACTTCCAGGCTCAACACCCAACTGAACAAATGGGGAATAACATTACCTCCTTCATGAACTATAAACGTGATGAAAAGGAAGACACTTCTGAGAGGATTAGGTTTGGGTTATCCAAGGCTATGCAGGAACCTGAAATGATGACCTCAAATAAACCTTGGGACTGCACTGCAGCTACAACTGCTAGTTTTGAGGGGACTTGCAGTGTCTTCCCTACAGTGACCGGGTTTCAATTTGGTCCGGCGTCGTTTGCCAATGAAGGGGATGGATCACCATGGAGCCAAAGTGTGTGTACCGGAAGTACATGCACAGCCATGGATCAACAAGGCCAGTTACATGAAAAACTTCAGGAAGAAAATGGAGATGATTTTAATACTGCAAGAGAAATTAGAAATGGATCCAATTTATTCAACGCGCAGTGTGTTTTGTGGGATTTACCATCTGAAGATCTAATTAATCCCATGGTATAG 1386 0.438 MCFGFLILNRKYEKEEQIVKLMGINCAIFFIYDFLHNISAIHKSSKSKAIQSPWILTLMDKEKLSTCCNVLDFSLPKSKRKGIRTENCLKDDDKRSTWRKIYGLVWERRGGGNLPSRGNSHFPHYSREIENLIQYRDMGRIPCCEKDSVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGQFSDAEEQTIVKLHSVFGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPVTHKPFSHLMAEIATTLAPPQAAHLAEAALGCFKDEVLHLLTKKKINFQAQHPTEQMGNNITSFMNYKRDEKEDTSERIRFGLSKAMQEPEMMTSNKPWDCTAATTASFEGTCSVFPTVTGFQFGPASFANEGDGSPWSQSVCTGSTCTAMDQQGQLHEKLQEENGDDFNTAREIRNGSNLFNAQCVLWDLPSEDLINPMV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1531 461 FunFam transcription factor MYB80 206 266 - -
Mibi05g1531 461 Gene3D - 206 265 - -
Mibi05g1531 461 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 253 IPR017930 -
Mibi05g1531 461 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 202 IPR017930 -
Mibi05g1531 461 SMART sant 150 200 IPR001005 -
Mibi05g1531 461 SMART sant 203 251 IPR001005 -
Mibi05g1531 461 Pfam Myb-like DNA-binding domain 205 247 IPR001005 -
Mibi05g1531 461 Pfam Myb-like DNA-binding domain 151 198 IPR001005 -
Mibi05g1531 461 SUPERFAMILY Homeodomain-like 149 245 IPR009057 -
Mibi05g1531 461 FunFam Transcription factor RAX3 144 204 - -
Mibi05g1531 461 PANTHER F14D16.11-RELATED 138 457 - -
Mibi05g1531 461 ProSiteProfiles Myb-like domain profile. 199 249 IPR001005 -
Mibi05g1531 461 CDD SANT 207 249 IPR001005 -
Mibi05g1531 461 CDD SANT 154 198 IPR001005 -
Mibi05g1531 461 ProSiteProfiles Myb-like domain profile. 146 198 IPR001005 -
Mibi05g1531 461 Gene3D - 151 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1531 Mibi-ChrMibi05 18039428 18043139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1531 138 461 MYB Transcription Factor Family AT5G56110 56.364 2.08e-116 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi05g1531 Myb_DNA-binding 2.7e-15 CL0123