Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1525 ATGTATAATCTAGTTGGTGGTGTTTGGTTTGGCTGTCCTGCCTCCTCTATTTCTGGCAGCTCAATTTGCATGTTGATAATATTTGAAGCCCCCGAGAAAGAGTCGTGTTGTAGCTACTCCCAATATGGGTCTTATAATATGCAGTCCAAGTCTGAAACGGCAAATCAGCTCAGGACTGATCAACATTCTTTTCCGCCAAACAATGGTTATTCCGAGCCTTGGTGGCGTGGTGTGGGGTACAATCCCATGACCCAAGCAATGACTGGAGCAAATGCATCTAATTCATCCTCACTGGAATGCCGTAATGCTGATTCGGAGTCAAATGACGGTCAATCTCTGTCCAATAGTGGGGTGAACGAGGAGGATGACGATGTTGCTAAAGAATCATCGGCTGCTGCTCCCAATCAATCTGGAAATTTCGTTCAAGAACACCGAGGGATGCAGCATGCTCCATCGTCTGCACCATCCATGCGAGATGAATGCTTTACACAGGCTCCACAGCTTGAACTTGTTGGTCATTCAATAGCATGTGCTTCACATCCGTATCAGGATCCATATTTTGCGGGAATGATGGCGGCTTATGGTCCCCACCAGCTGGGATATCCTCCTTTTATGGGAATGCCACAGGCCAGAATGCCTTTGCCCCTTGAGATGGCACAAGAACCTGTTTATGTAAATGCGAAACAATACCCAGCAATTCTTAGGCGTAGACAGGCTCGTGCGAAAGCGGAGCTTGAGAGGAAGCTAATAAAAGTTAGAAAGCCATACCTTCATGAATCTCGGCATCAGCATGCAATGAGGAGGGCAAGGGGTACCGGAGGTCGCTTTGCAAAGAAAAATGGTGCTACTGATGACTCTGGCAAAGAAAAGGATGTGGGATCTGGTGCAATGTTATCTTCACAGTCAGTTAGTTCATCTGGTTCTGAACCATTACCCTGTGAGTCTGCTGAAACTTGGAACTCTCCTAACATGCAACAAGATGCCAGGGGCTATAAACTTCCTGACCAGTATGAAGCACACAACTATGCAAATAATAGTGGTCCTTATCGTAACCATAGTGGCTTGCAATCTTCCACTTATCATTTGCACTCAGGTGAAAGAGTAGAGGAAGGGGACTGTTCAGGACAACAACGGGGGAGCATCTCTTCTGAACACACTTCACAGAGGCGTCTTGCAATCCAGTAG 1185 0.4667 MYNLVGGVWFGCPASSISGSSICMLIIFEAPEKESCCSYSQYGSYNMQSKSETANQLRTDQHSFPPNNGYSEPWWRGVGYNPMTQAMTGANASNSSSLECRNADSESNDGQSLSNSGVNEEDDDVAKESSAAAPNQSGNFVQEHRGMQHAPSSAPSMRDECFTQAPQLELVGHSIACASHPYQDPYFAGMMAAYGPHQLGYPPFMGMPQARMPLPLEMAQEPVYVNAKQYPAILRRRQARAKAELERKLIKVRKPYLHESRHQHAMRRARGTGGRFAKKNGATDDSGKEKDVGSGAMLSSQSVSSSGSEPLPCESAETWNSPNMQQDARGYKLPDQYEAHNYANNSGPYRNHSGLQSSTYHLHSGERVEEGDCSGQQRGSISSEHTSQRRLAIQ 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1525 394 MobiDBLite consensus disorder prediction 295 327 - -
Mibi05g1525 394 ProSiteProfiles NF-YA/HAP2 family profile. 219 279 IPR001289 GO:0003700|GO:0006355
Mibi05g1525 394 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 221 276 IPR001289 GO:0003700|GO:0006355
Mibi05g1525 394 SMART cbf3 218 279 IPR001289 GO:0003700|GO:0006355
Mibi05g1525 394 MobiDBLite consensus disorder prediction 375 394 - -
Mibi05g1525 394 MobiDBLite consensus disorder prediction 258 394 - -
Mibi05g1525 394 Gene3D - 219 280 - -
Mibi05g1525 394 ProSitePatterns NF-YA/HAP2 subunit signature. 224 244 IPR018362 GO:0003677|GO:0016602
Mibi05g1525 394 MobiDBLite consensus disorder prediction 86 137 - -
Mibi05g1525 394 MobiDBLite consensus disorder prediction 258 274 - -
Mibi05g1525 394 MobiDBLite consensus disorder prediction 339 362 - -
Mibi05g1525 394 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 63 330 IPR001289 GO:0003700|GO:0006355
Mibi05g1525 394 MobiDBLite consensus disorder prediction 86 119 - -
Mibi05g1525 394 PRINTS CCAAT-binding transcription factor subunit B signature 222 244 IPR001289 GO:0003700|GO:0006355
Mibi05g1525 394 PRINTS CCAAT-binding transcription factor subunit B signature 253 276 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1525 Mibi-ChrMibi05 17991400 17994246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1525 47 321 CCAAT-HAP2 Transcription Factor Family AT5G12840 50.534 1.47e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Mibi05g1525 CBFB_NFYA 5.4e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1525 05 17991400 17994246 Mibi05g1525 05 17991400 17994246 ECH