Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1508 ATGGCTCCGTGGTTTCAACAACTTCCTGGAGATGAAGTTTCATTTTTTGTGCAACAAGTGGGTCAACCTGATATGCAATACACATGTGCCGTTAGTAGAGATGACGTGTTTACCCCTCTTGATCATAATTTCTTTCCCATAAGAGCACCTAATGGTGATCGATACTTTAAAATAAGAGTTAATAGTATAAAAAGTGACTTTTTCCCGTTTCGTCCTAACCTAAACTCTATCTCTGATCCCGCACAAACTGAGTTCTTCACGGTCCCAGAAAATTTGATAGAGCAAACCATTAGTCCAATTCTCCTCCGTTTAAATATTCCTGAAGATATTCACAAGTCCATGATCAAAATGATCTTGGAAGTTGCGAGACGTATGTCTAACATAAATCGAAATTGTCGGAGTTTCTTGCCTATTGCTGTGACTATTATGGTTGACACCTTTCGGGATGACTATGAGGATGATGACGACGACGACTATGAGGATGATGATGAGGACGATGATGACTATGATGAAGCCGTGGAAGAATCTATGGAGTATCAACATCAGACATTGGTCCCTGCGAGTGAATTGTCGATTGAAAAATTGGAGAGAGTGAAAATTGGAGGAGAAGGAAAAGATGAATTAAGTTGTGTAATTTGTTCAGAATATTTTGAAGTTGGTGGTGATGAAGAAGCCATTCGCATGCCTTGCCAGCATTTGTTTCATTCAAGATGTATTCTTGTTTGGTTAAAACGCAATAATTGTTGTCCCCTTGTGTCGCTTTCAATTGCCTCCTGCAACTGA 783 0.3959 MAPWFQQLPGDEVSFFVQQVGQPDMQYTCAVSRDDVFTPLDHNFFPIRAPNGDRYFKIRVNSIKSDFFPFRPNLNSISDPAQTEFFTVPENLIEQTISPILLRLNIPEDIHKSMIKMILEVARRMSNINRNCRSFLPIAVTIMVDTFRDDYEDDDDDDYEDDDEDDDDYDEAVEESMEYQHQTLVPASELSIEKLERVKIGGEGKDELSCVICSEYFEVGGDEEAIRMPCQHLFHSRCILVWLKRNNCCPLVSLSIASCN 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1508 260 ProSiteProfiles Zinc finger RING-type profile. 210 251 IPR001841 -
Mibi05g1508 260 Pfam Ring finger domain 209 251 IPR001841 -
Mibi05g1508 260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 172 257 IPR013083 -
Mibi05g1508 260 SMART ring_2 210 252 IPR001841 -
Mibi05g1508 260 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 159 251 - -
Mibi05g1508 260 SUPERFAMILY RING/U-box 205 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1508 Mibi-ChrMibi05 17792159 17792941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1508 186 260 C3H Transcription Factor Family AT1G68180 42.500 2.14e-10 57.4