Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi05g1507 | ATGGCTCCGGGCTTTCCGGAACCTCCTAGAGAAGAAGTTTCTTTCTTTGAGGAAGGTCGACCTGCTAAGCAATACACATGTGTTGTTTGTAAAGATGACATACCTACACCTATTGATCATAATTCCTTTTCCACAAGAGCTCCTAATGGTGATCGATACTTTAAAATAAGAGTCAATAGTATAAAAAATGAGTACGGGCCTCACATAGACTTTTTCTCCGATGACGCACCAACAGAGTTCTTCACAGCCCCGGAAAATTTGATAGAGCAAACCATAAGTCCAGTTCTCCTTCGTTTAAATATTCCTGAACATATTCGCATCTCCATGATCACAAAGATCTTGGAAGTTGCTAGACGTATGTCTGACTCTGATCAAACTAGTGGGACTTTCTTGTATATGGCTGTGACTATTACAATTGGCACTTTTTACGAAAACCCTGAGGATGATGTTACGGATGATGAATACGACTATGTGACTATTACACTCGACTACACTTTTCATGACAAATGTGAGGATGATGATGAGTATGGTGACGCCTATTATGAAGCCGTGGAAGAATCTATGGAGTATCAACATCAGACATGGGTCCCTGCAAGTGAATTGTCCATTGAAAACTTGGAAAGAGTGAAAATTGGAAAGAAAGGAATAGATGAATTAAATTGTGCAATTTGTTTAGAAGATTTTGAAGTTGATGATGAAGAAGAAGCCATTCTCATGCCTTGCCAGCATTTGTTTCATTCAAGATGTATTCTTGGTTGGTTACACCGTAGAAATAGTTGTCCCTTGTGTCGCTTTCTATTGCCTCCTGATGATTGA | 816 | 0.3934 | MAPGFPEPPREEVSFFEEGRPAKQYTCVVCKDDIPTPIDHNSFSTRAPNGDRYFKIRVNSIKNEYGPHIDFFSDDAPTEFFTAPENLIEQTISPVLLRLNIPEHIRISMITKILEVARRMSDSDQTSGTFLYMAVTITIGTFYENPEDDVTDDEYDYVTITLDYTFHDKCEDDDEYGDAYYEAVEESMEYQHQTWVPASELSIENLERVKIGKKGIDELNCAICLEDFEVDDEEEAILMPCQHLFHSRCILGWLHRRNSCPLCRFLLPPDD | 271 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi05g1507 | 271 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 164 | 268 | - | - | |
| Mibi05g1507 | 271 | FunFam | E3 ubiquitin-protein ligase RNF181 | 186 | 270 | - | - | |
| Mibi05g1507 | 271 | ProSiteProfiles | Zinc finger RING-type profile. | 221 | 264 | IPR001841 | - | |
| Mibi05g1507 | 271 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 183 | 269 | IPR013083 | - | |
| Mibi05g1507 | 271 | SMART | ring_2 | 221 | 263 | IPR001841 | - | |
| Mibi05g1507 | 271 | SUPERFAMILY | RING/U-box | 214 | 269 | - | - | |
| Mibi05g1507 | 271 | SMART | ringv_2 | 220 | 264 | IPR011016 | GO:0008270 | |
| Mibi05g1507 | 271 | Pfam | Ring finger domain | 220 | 264 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi05g1507 | Mibi-ChrMibi05 | 17766801 | 17767616 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi05g1507 | 174 | 271 | C3H Transcription Factor Family | AT5G01980 | 44.000 | 3.29e-15 | 73.2 |