Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1506 ATGGCTTCGGGATTTCTACAACTTCCTAGAGAAGAAGTTTCTTTTTTGGAGGAACATGAAGGTCAACCTGATATTCAATACACATGTGTTGTTTGTGAAGATGAGATATTTACCCCTATTGATCATAATTTCTTTCGAATTAGAGCTCCTAATGGTGATCGATACTTTAAAATGAGAGTCAATAGAATAAAAAACCACTGGCTACATCATAACTTAGACTTTTTCTCTGATCGTGCACCAACTAAGTTCTTCAAGGCCCCAGAAAATTTGATAGAGCAAACCATAAGGCCAGTTCTCCTTCGTTTAAATATTTCTGAACATATTCGCAACTCCATGATCACAAAGATTTTGGAAGTTGCGAGACGTATGTCTGATTCTCATCGAACTTGTCGGACTTTCTTGTATATGGCTGTGACTATTAAAGTTGACATTTTTCACGACAACTATGAACATCAGACATGGGTCCCTGCGAGTGAATTGTCGATTGGAAAATTGGAGAGAGTGAAAATTGGAGAAGAAGGAAAAGATGAATCAAGTTGTGCAATTTGTTCAGACCATTTTGAAGCTGATGATGATGAAGAAGCTATTCGCATGCCTTGCCAGCATTTGTTTCATTCAAGATGTATTCTTATTTGGTTACAACGCAGTAATAGTTGTCCCTTGTGTCGCTTTCAATTGCCTCCAGCAATTGATGATTAA 699 0.3748 MASGFLQLPREEVSFLEEHEGQPDIQYTCVVCEDEIFTPIDHNFFRIRAPNGDRYFKMRVNRIKNHWLHHNLDFFSDRAPTKFFKAPENLIEQTIRPVLLRLNISEHIRNSMITKILEVARRMSDSHRTCRTFLYMAVTIKVDIFHDNYEHQTWVPASELSIGKLERVKIGEEGKDESSCAICSDHFEADDDEEAIRMPCQHLFHSRCILIWLQRSNSCPLCRFQLPPAIDD 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1506 232 SUPERFAMILY RING/U-box 174 229 - -
Mibi05g1506 232 SMART ring_2 180 222 IPR001841 -
Mibi05g1506 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 230 IPR013083 -
Mibi05g1506 232 ProSiteProfiles Zinc finger RING-type profile. 180 223 IPR001841 -
Mibi05g1506 232 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 113 227 - -
Mibi05g1506 232 Pfam Ring finger domain 179 223 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1506 Mibi-ChrMibi05 17762523 17763221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1506 133 227 C3H Transcription Factor Family AT1G14200 37.500 5.00e-16 71.6