Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1503 ATGTCCAAGGAAAAAATGAGGGAATCTTCCACGCATGTAATTTTTGTTGATGTGAAGAAACTTCTTAAGAAACCATTCCTATATAAATCGTTCTTCCCTCTTTTTCATTCTGCACTGTTATTGCCCCTGCAAATCGGAAAGAAGATCGCTAGGGTTGGAGATTCTGTGACTTCTGCTGATATGATGTCCTATTCCAGAAGATCAAGGTATTCTCGATCACCTTCTCCATACAAGGGATATGGCAGGTCTGTCTCTAGGTCTCCGTCTAGGTCAAGGTCTAGAAGCTTCTCAAGGAGCCCGTCAAGAGATGCTGAGAATCCTGGTAATAACCTGTATGTTACAGGCTTGTCTCCACGGATTACTAAGAGAGAGCTGGAGAAGCATTTTGCCAGTGAGGGGAAAGTCATGGATGTTCATTTAGTTGTTGATCCTTGGACGAGAGACTCACGGGGGTTTGGATTTGTGACAATGGATACTGTTGAGGAGGCTGACCGATGCATAAAGTATCTTGATCGCTCTGTGCTTGAAGGGCGTGTCATCACAGTAGAGAAGTTTCTGTTGCAGCAGGTTAGCTGTGTGAAGCAGCTCTTCGTCAAATTTACAAATCTCAACTAA 615 0.4374 MSKEKMRESSTHVIFVDVKKLLKKPFLYKSFFPLFHSALLLPLQIGKKIARVGDSVTSADMMSYSRRSRYSRSPSPYKGYGRSVSRSPSRSRSRSFSRSPSRDAENPGNNLYVTGLSPRITKRELEKHFASEGKVMDVHLVVDPWTRDSRGFGFVTMDTVEEADRCIKYLDRSVLEGRVITVEKFLLQQVSCVKQLFVKFTNLN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1503 204 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 109 183 IPR000504 GO:0003723
Mibi05g1503 204 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 105 184 - -
Mibi05g1503 204 Gene3D - 53 186 IPR012677 -
Mibi05g1503 204 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 111 180 IPR000504 GO:0003723
Mibi05g1503 204 SUPERFAMILY RNA-binding domain, RBD 67 184 IPR035979 GO:0003676
Mibi05g1503 204 SMART rrm1_1 110 183 IPR000504 GO:0003723
Mibi05g1503 204 MobiDBLite consensus disorder prediction 63 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1503 Mibi-ChrMibi05 17734047 17736174 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1503 110 202 Eukaryotic Initiation Factors Gene Family AT2G36660 34.043 1.86e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1503 05 17734047 17736174 Mibi05g1503 05 17734047 17736174 ECH