Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1500 ATGCTAGCTCAACGAGTATTTTCATCATCTGCTTCTAAGATGTCCTACTCCAGAAGATCAAGGTATTCTCCATCACCTCTGTACAGGCGATATGGTAGGTCTGTTTCCAGTTCTCTGTCAAGGTCAAGATCTAGGAGCTTTTCAAGGAGCCCATCAAGAGAAGTAGAGAATCCTGGTAACAATTTGTATGTGACAGGGTTTTCTTCTCGGATTACCAAGAGAGAATTGGAAAAGCATTTTGCGAGTGAGGGAAAAGTAATTGACGTTCACCTGGTTGTTGATCCATGGACAAGAGAGTCACGAGGGTTTGGATTTGTGACTATGGAAACTGTCAAGGATGCTGAACGTTGTGTAAAGTACCTGGATCGCTCTATTCTTGGAGGGCGTGTCATTACAGTAGAAAAGTTTCCTTGGCAGCAGATCATTGGGGCTAGAAGAAGTCGGGGTCGAACCCCAACTCCTGGTAGGTATCTTGGGCTAAAGGCTGGTCGATCACGTCATCGTTCTTCGAGCTATTCTTCTCGCCGCTCCCCTAGCTATTCTTCTTACAGAAGAAGCTATAGCCGATCACCATATTCTTCTGATCGCGGTAGTAGTCCTTCCTATTCTCCTTATTACGGTCGACGGAGGTCTTACTCCCCATATTATAGTCGGGATAGATCTTATAGCCCTTATGATCGACGCAGATCCTACTCTCCGTATTATCGACATAGGTCATACTCTCGATCCCGCTCACCATACAGCAGATCACCTGTCATCAGGAGGCGTGATAGATACTCTCCTTATGAGTCACCTGATGATCACTATTACAGAAGGCACCGGTACAGGTACCTATCCCCAAGTGCCTCCCCAAGGCCAAGGAGAAGTTCAAGGAGGTATTCCCCTAGTGTCTCTCCAGTGTATAGGAGGAGCTCAAGAAGGAGGAGGTATTCCCCCAGTGTCTCTCCAGTATATAGGAGTAGCTCAAGAAGGAGGAGGTATTCTCGGAGTCTGTCTCCTATACCAAGGAGGAGTTCACGAAGGAGGAGCTATTCACCAAGTGTTTCCCCGAGACCAAGGAGGAGTTCACGGAGGAGCTATTCTCGCAGCATTTCTCCTAGACCAAGAGGTAGTAGGAGAGGTGGTTTTTCCAAACGTGGGCATACACCAGTCAGTGATAGAAGCTACTCAAGAAGCCCAAGTGTGAGTTCTAGTTCTAGATCAGTATCAAGGTCTCTCACCCCCTGA 1227 0.4727 MLAQRVFSSSASKMSYSRRSRYSPSPLYRRYGRSVSSSLSRSRSRSFSRSPSREVENPGNNLYVTGFSSRITKRELEKHFASEGKVIDVHLVVDPWTRESRGFGFVTMETVKDAERCVKYLDRSILGGRVITVEKFPWQQIIGARRSRGRTPTPGRYLGLKAGRSRHRSSSYSSRRSPSYSSYRRSYSRSPYSSDRGSSPSYSPYYGRRRSYSPYYSRDRSYSPYDRRRSYSPYYRHRSYSRSRSPYSRSPVIRRRDRYSPYESPDDHYYRRHRYRYLSPSASPRPRRSSRRYSPSVSPVYRRSSRRRRYSPSVSPVYRSSSRRRRYSRSLSPIPRRSSRRRSYSPSVSPRPRRSSRRSYSRSISPRPRGSRRGGFSKRGHTPVSDRSYSRSPSVSSSSRSVSRSLTP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1500 408 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 60 134 IPR000504 GO:0003723
Mibi05g1500 408 SUPERFAMILY RNA-binding domain, RBD 41 146 IPR035979 GO:0003676
Mibi05g1500 408 MobiDBLite consensus disorder prediction 332 354 - -
Mibi05g1500 408 MobiDBLite consensus disorder prediction 1 22 - -
Mibi05g1500 408 SMART rrm1_1 61 134 IPR000504 GO:0003723
Mibi05g1500 408 MobiDBLite consensus disorder prediction 145 408 - -
Mibi05g1500 408 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 62 131 IPR000504 GO:0003723
Mibi05g1500 408 MobiDBLite consensus disorder prediction 172 206 - -
Mibi05g1500 408 MobiDBLite consensus disorder prediction 283 301 - -
Mibi05g1500 408 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 50 276 - -
Mibi05g1500 408 MobiDBLite consensus disorder prediction 1 36 - -
Mibi05g1500 408 MobiDBLite consensus disorder prediction 386 408 - -
Mibi05g1500 408 Gene3D - 8 137 IPR012677 -
Mibi05g1500 408 MobiDBLite consensus disorder prediction 250 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1500 Mibi-ChrMibi05 17720143 17723173 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1500 62 133 Eukaryotic Initiation Factors Gene Family AT1G49760 36.111 6.18e-06 46.6