Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1483 ATGAAGTGGGACACAGGAATGTTCTCACCTTCACAATACATCACCGATTGCAACACCAACTGGATTGTTGAAGAGAATCGGAACACGAAATGGACTCGAGCTGAGAACAAAATCTTCGAGAATGCACTTGCTCTTTACGATAAGGATACACCAGATCGGTGGCAGAAAGTGGCTGAAATGATCCCTGGGAAGACGGTAGGCGATGTTCTGAAGCAGTATCAACAGCTTGAAGATGATGTTTGTAACATTGAAGCAGGTCTGGTTTCAGTTCCTGAATATTACAATTATGCCACCACCACTACCACCACCACTAATCCTTCCTCCTCACCTTTCACCTTGGATTCTTGGGCTAATTTCTCTTCTGGGTATGATCCCTCTCTCGGATTTCATGCAAAGAGAGCCTCCTCTGGTAGACCACCTTCTGAAAATGAAAGGAAGAAAGGAGTCCCTTGGACTGAAGATGAACACAAATTGTTTCTTTTGGGGCTGAAGAAGCATGGGAAGGGAGATTGGAGGAACATATCAAGGAACTTTGTGGTGACTCGAACACCGACTCAGGTAGCTAGCCATGCTCAAAAGTATTTCATAAGGCAACTTTCAGGAGGGAAAGACAAGAGAAGAGCAAGCATCCATGACATAACCACAGTGAATCTTGCAGAAGCTTCAATGGCAACAGTAAATTCTCATTCAAGAAACAACACCAAGAAGTCATCATCTTCTTCTTCTTCTACTACTTCTACTTCACCGAAACAGAAAGAGAAACCCATGAACATGATGATGATGCCCTCTTTACAGCAGCAGAATTCTGCAGTTTCCAGCACAGAGTTTCAGTGGACCCAACAGCTCCAACAGCCACTGATGGATGCTCTGAGTGATCCTGTACTTGATGAACTGTTCATGTCTAATTCTTACGAGATTGGTGATGACTTATCATCATTTGGGTTTAGAATGCAGGACCAGAATCTGTACTCAAATTCTCTTCTTAATCATGAATCTTCTTCCTACTTAGGGCCTCTCAGTCAAAACATGGTTTTCCAGATGCCATGA 1047 0.4336 MKWDTGMFSPSQYITDCNTNWIVEENRNTKWTRAENKIFENALALYDKDTPDRWQKVAEMIPGKTVGDVLKQYQQLEDDVCNIEAGLVSVPEYYNYATTTTTTTNPSSSPFTLDSWANFSSGYDPSLGFHAKRASSGRPPSENERKKGVPWTEDEHKLFLLGLKKHGKGDWRNISRNFVVTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLAEASMATVNSHSRNNTKKSSSSSSSTTSTSPKQKEKPMNMMMMPSLQQQNSAVSSTEFQWTQQLQQPLMDALSDPVLDELFMSNSYEIGDDLSSFGFRMQDQNLYSNSLLNHESSSYLGPLSQNMVFQMP 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1483 348 ProSiteProfiles Myb-like domain profile. 23 77 IPR001005 -
Mibi05g1483 348 Gene3D - 22 90 - -
Mibi05g1483 348 MobiDBLite consensus disorder prediction 225 254 - -
Mibi05g1483 348 SUPERFAMILY Homeodomain-like 145 198 IPR009057 -
Mibi05g1483 348 MobiDBLite consensus disorder prediction 130 150 - -
Mibi05g1483 348 SUPERFAMILY Homeodomain-like 29 84 IPR009057 -
Mibi05g1483 348 CDD SANT 150 195 IPR001005 -
Mibi05g1483 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 143 199 IPR017930 -
Mibi05g1483 348 ProSiteProfiles Myb-like domain profile. 143 195 IPR001005 -
Mibi05g1483 348 Pfam Myb-like DNA-binding domain 150 195 IPR001005 -
Mibi05g1483 348 Pfam Myb-like DNA-binding domain 30 76 IPR001005 -
Mibi05g1483 348 Gene3D - 149 199 - -
Mibi05g1483 348 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 146 198 IPR006447 GO:0003677
Mibi05g1483 348 FunFam Transcription factor SRM1 23 90 - -
Mibi05g1483 348 CDD SANT 30 76 IPR001005 -
Mibi05g1483 348 MobiDBLite consensus disorder prediction 225 253 - -
Mibi05g1483 348 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 25 274 IPR043363 -
Mibi05g1483 348 FunFam transcription factor MYB1R1 149 200 - -
Mibi05g1483 348 ProSiteProfiles SANT domain profile. 151 199 IPR017884 -
Mibi05g1483 348 SMART sant 147 197 IPR001005 -
Mibi05g1483 348 SMART sant 27 79 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1483 Mibi-ChrMibi05 17520024 17521372 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi05g1483 Myb_DNA-binding 3.7e-12 CL0123