Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1474 ATGGCCACCTTTTCTGGTTTCTTGGCTAAGTTCTTCTCTCTTTTCATCCTCTTCCTCCACCTGGGCTGCTTCATCTTCTCCACCACCGGCTCCGGCGCTGAACCAGAAGAACATTGTCCCAGAAAATCATCTTCCTCTAAGAAACGTAAGGTCTCCCCTGTTATTTCTCACTCTTCTCGCCAACCTTCTCCTTCCCATCCCAAATTCAAAACACGCAAGGCCATTTCCTCTTCTTGGATCTTCATCAAACACCTCTTCTCCCCTAAATCCTGCAAAACCACCGACATTCTCCATGGATCCCCTCAATCCTCCGCCTCCTCCTCCGCCATAACATCCACCAGATCCTCCCAACAGTCCTTGATCTCTCTCGCACAAACCGAATCTCACGCGCTAGCGAAAAAACCGTCGCCGTCGTGTCCAGATTCCGATATCGCCGCCGATAACAACCACTTCTTCCCCCTCCGCAACGACATCTTCCCCTGCACAGCCTGCGGCGAGGTTTTCCAGAAACCACAACTCCTCGAACACCATCAATCTCTCAAACACGCCGTTTCAGAGCTCCTAGAAGCCGACGCTGGCCAAAACATAGTCCAGATAATCTTCAAATCCGGCTGGACAAACACACAGAAATGCCCTAGAATCAGCCGGATCTTGAAAATCCATAACCACCCGAAGATACTCTCCAAATTCGAAGAATACAGAGAGACGGTGAAGGCAAAAGCGGCAAGAAACGGCGGAGTGAAGAAACGCGATGAGAGATGTATCGCCGATGGCAATGAGCTCATGAGATTCCATTGTTCGACGTTCCTGTGTGAGTTGGGACTAAACGGGAGTTCTGGAATTTGCGGGCAGCAGTATTGTAATATTTGCGGGATAATCAAATCGGGATTCTCGCCCAAGTTGGATGGAATTTCCACGCTGTCGACGAGCTGGAGGGCACACGTGGCGATACCGGAGGAGGTGGAGGAGGAGTTTAAGTTCATGAATGTGAAACGGGCCATGCTGGTTTGTCGGGTCATTGCGGGCCGGGTCGGGTCTGAGTCCGACGAGGCGGAGAAGGAGGATGGGGGCTTTGATTCGGTGATGGCGCGTGGAGGGAGTGGGGTTTACACCCGGCTTGATGAAGAGGAGCTTTTGGTGTTCAATCCTAGAGCTGTGCTTCCTTGCTTTGTGATTGTGTATAGCGTTTGA 1191 0.5139 MATFSGFLAKFFSLFILFLHLGCFIFSTTGSGAEPEEHCPRKSSSSKKRKVSPVISHSSRQPSPSHPKFKTRKAISSSWIFIKHLFSPKSCKTTDILHGSPQSSASSSAITSTRSSQQSLISLAQTESHALAKKPSPSCPDSDIAADNNHFFPLRNDIFPCTACGEVFQKPQLLEHHQSLKHAVSELLEADAGQNIVQIIFKSGWTNTQKCPRISRILKIHNHPKILSKFEEYRETVKAKAARNGGVKKRDERCIADGNELMRFHCSTFLCELGLNGSSGICGQQYCNICGIIKSGFSPKLDGISTLSTSWRAHVAIPEEVEEEFKFMNVKRAMLVCRVIAGRVGSESDEAEKEDGGFDSVMARGGSGVYTRLDEEELLVFNPRAVLPCFVIVYSV 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1474 396 MobiDBLite consensus disorder prediction 31 70 - -
Mibi05g1474 396 Gene3D - 183 395 - -
Mibi05g1474 396 ProSitePatterns Zinc finger C2H2 type domain signature. 161 182 IPR013087 -
Mibi05g1474 396 SUPERFAMILY ADP-ribosylation 184 395 - -
Mibi05g1474 396 MobiDBLite consensus disorder prediction 49 65 - -
Mibi05g1474 396 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 77 394 - -
Mibi05g1474 396 ProSiteProfiles Zinc finger C2H2 type domain profile. 159 187 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1474 Mibi-ChrMibi05 17436216 17437406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1474 79 396 C2H2 Transcription Factor Family AT2G29660 55.793 4.83e-110 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi05g1474 None None None