Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1471 ATGGAGAGTAATAAGCAGAGAGAGATGAAAATGATGCCTCTGAATAACCCTCCCACCATTTCCATGCAGAGATCTTCTTCTTCATCTTCATCAACAGGGCCTCCTTTGAGTGCCATAAACAGGTTCTTATGGGGCCAACACTTGTCTGCTCTCACATGGCATAACGTTGACCACGACATTGAAGGAAGTAATTTGATCCAAGGGTTCTTAGCAAATAATAACAACAATGAAGTTCATCATCACATGATGATCTCTACAGTACTGAAGAATAAACAAGTTCATGCAGGGAAGAGAATCAACAAGAAAGGTTCTTCTTCAGCCTCCTTGATCAAAGGACAGTGGACTGACGAAGAAGACAGGAAACTGGTGAAGCTGGTGAATGAATATGGAGTAAGGAAATGGGCACAAATAGCTGAGAATTTGGAGGGAAGAGCTGGCAAGCAATGTAGAGAGAGATGGCATAATCATCTACGTCCTCATATTAAGAAGGATAGTTGGAGTGAGGAAGAAGAGAAAGTATTGGTAGAAACACATGCAAAAGTAGGAAACAGGTGGGCAGAGATAGCCAAAAAGATTCCAGGAAGAACAGAGAATTCAATCAAGAACCATTGGAATGCCACCAAAAGGAGACAGAACTCCAAAAGAAACCTCAACAAATCTTCGAACAAACATTCCAATAACAACAATGGAAGAAAGCCTCCTTCTTCCATTCTCCAAGATTACATCAAAAGCATCAAGACCCTCTCCAATAATAACAATGACCAACTTCAGGGTCCACCTGATGGAAACCAGTTCAATCTTGTGATTTCTGATCATCACCATCATCTTCAAGAAGATCTCTCTCATTGTGAACCTGTGATGTCTGAAACTTTTGATGATGATGAGCTTCTTTTCATGCAAAAGTTCTTCCCTGTGAATTATGATCAGAACCAGCAAGTTCATTCCACTTTGGATTTTTATCAAACTAGCGGTGGGCATGAAGGTTATCCTCCTGAACAGAGTGTTTCTGCTAATTTTGCCGCTCCAATGGTGAAACAACAACCCCACCACCACCACCATCATCCTCATCATTCTGATCTGTTTCTGGATCAGTTATTGAATGGGATTGGTTATAATAATAATAATCCATCCATTTTCTGCTATGATTATTATGGTAAAGATCAGAATTTGAACATGGGTTTGCAGGTAGAGGATGGTGATCAGCAAGCTTGGTGTGAAGGAAAGAGAGATTTGGATTTGATGGAATTGGTTTCCTCTCAGATTTCAACTAGCACCAACTAG 1281 0.4052 MESNKQREMKMMPLNNPPTISMQRSSSSSSSTGPPLSAINRFLWGQHLSALTWHNVDHDIEGSNLIQGFLANNNNNEVHHHMMISTVLKNKQVHAGKRINKKGSSSASLIKGQWTDEEDRKLVKLVNEYGVRKWAQIAENLEGRAGKQCRERWHNHLRPHIKKDSWSEEEEKVLVETHAKVGNRWAEIAKKIPGRTENSIKNHWNATKRRQNSKRNLNKSSNKHSNNNNGRKPPSSILQDYIKSIKTLSNNNNDQLQGPPDGNQFNLVISDHHHHLQEDLSHCEPVMSETFDDDELLFMQKFFPVNYDQNQQVHSTLDFYQTSGGHEGYPPEQSVSANFAAPMVKQQPHHHHHHPHHSDLFLDQLLNGIGYNNNNPSIFCYDYYGKDQNLNMGLQVEDGDQQAWCEGKRDLDLMELVSSQISTSTN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1471 426 FunFam Transcriptional activator Myb isoform A 110 163 - -
Mibi05g1471 426 CDD SANT 165 208 IPR001005 -
Mibi05g1471 426 MobiDBLite consensus disorder prediction 1 33 - -
Mibi05g1471 426 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Mibi05g1471 426 Pfam Myb-like DNA-binding domain 114 172 - -
Mibi05g1471 426 Gene3D - 110 162 - -
Mibi05g1471 426 MobiDBLite consensus disorder prediction 192 236 - -
Mibi05g1471 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Mibi05g1471 426 MobiDBLite consensus disorder prediction 218 236 - -
Mibi05g1471 426 CDD SANT 114 157 IPR001005 -
Mibi05g1471 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Mibi05g1471 426 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Mibi05g1471 426 SMART sant 110 159 IPR001005 -
Mibi05g1471 426 SMART sant 162 210 IPR001005 -
Mibi05g1471 426 Gene3D - 164 234 - -
Mibi05g1471 426 PANTHER MYB PROTEIN-RELATED 95 233 - -
Mibi05g1471 426 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Mibi05g1471 426 MobiDBLite consensus disorder prediction 16 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1471 Mibi-ChrMibi05 17417360 17420027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1471 32 424 MYB Transcription Factor Family AT5G58850 38.636 5.09e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi05g1471 Myb_DNA-bind_6 4.1e-19 CL0123