Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1468 ATGCCGACCATTGCTGGGCGTAAGCTCTCAAGGGAATCTCTCTCTGAGACCATGGGCATCTTGCTGGAGAAAACTGCTTCCGATGCTCGATCTGACTCCAATTCCACTCCTCGTAAGCGAAAATTGAGATCCCATGGGCCGCTCATTATGGACAGTCCGATTTCTTCGCCCACCAAACGAAAATCGTCTCGCCGATGTAGCACTGAGAACCCAAATCGCCCAGTCACTGCGAGTGAGATGGTTACTAATGGAGGTGAAATCAAATCGAAAAACTCGCCCTCGAAGCCAATGCAAGATGCTTTTGCTGATAAAATTAAGTGGGACCCCAAAGATGGTGAGCAAGTAAGTATGGTGAAGGAGGCATTGCACGTGTCCACGGCACCATCTACAATTGTTTGCCGTGAAGACGAGCAGAATATGGTTTTGGAGTTCTGTAAGTCATGCGTTGAGCACAAGAAAGCCGGGAGTATGTACATATGTGGGTGTCCTGGTACTGGAAAATCGCTATCCATGGAGAAAGTGAAAGAGATTTTAGTCGATTGGGCTGGACAGGCAAGCTTCCTTCAGCCCGATGTCCTGTCAGTGAATTGTACATCACTTTCTAATACATCTGACATTTTCAGCAAGATACTTGGTTTAAACCAACCACGGGGAAAAAGGACTTCAGCTTCTCCCTTACAACAACTTCAGAGCTTGTACTCTCAAACGTCGTCCAGCCAGAACATGATATTAATAGTGGTTGACGAATTAGATTATCTAATCACCAAAGATAGGGCTGTGCTTCACGATCTCTTCATGCTCACCACTTTCCCGTTTTCTAGATGTATATTAATAGGGATATCAAATGCAATTGACCTTGCAGATCGTTTTCTTCCAAGGTTGAAATCTTTGAATTGCAAGCCTATAATTGTAACATTTCGAGCATACTCTAAAGACCAGATCCTCAGCATTCTGAAAGAAAGGCTAAGGGAACTGCCTTACATTGTGTTCCAACATCAAGCACTAGAGCTCTGTGCAAGGAAAGTTGCTGCTGCTTCTGGAGACATGCGAAAAGCTCTTTGTATTTGCAGGAGTGCAATTGAGATGCTGGAGGCAGAAATTAGAGAATCTATTGGCCTTTCAGAAATTTCATTGGAAGAGAGAGCTTCCCCTCAACAAAAGATAGCTTCAGACCTCGATCATGTAAAAGGACAAGAATTTGATGTTGTAAGGATTGATCATATGGCTCTTGCCTTGTCTAAGACATATAAATCTCCCGTGGTGGATACAATACAGTCTCTACCGCATCATCAACAGATTATCCTATGCTCTTCGATGAAACAATTCCGTGGAGCGAAGAAAGACACAATCCTTGGTGAGTTGTACAAATCTTACACTGGCGTATGCAAATCATCACTGATTCCTCCGGCTGGAATTTTGGAATTTTCAAATATGTGTAGAGTATTGAATGATCAGGGGCTTATTAAACTAGGACCATCACGGGAGGACAAATTGAAGAGGGTGACACTAAACATAGATGAAGCTGATATTACCTTTGCATTGAAGGGAATCCGTTTCTTTAGAAACTGTCTTCAATAA 1578 0.4316 MPTIAGRKLSRESLSETMGILLEKTASDARSDSNSTPRKRKLRSHGPLIMDSPISSPTKRKSSRRCSTENPNRPVTASEMVTNGGEIKSKNSPSKPMQDAFADKIKWDPKDGEQVSMVKEALHVSTAPSTIVCREDEQNMVLEFCKSCVEHKKAGSMYICGCPGTGKSLSMEKVKEILVDWAGQASFLQPDVLSVNCTSLSNTSDIFSKILGLNQPRGKRTSASPLQQLQSLYSQTSSSQNMILIVVDELDYLITKDRAVLHDLFMLTTFPFSRCILIGISNAIDLADRFLPRLKSLNCKPIIVTFRAYSKDQILSILKERLRELPYIVFQHQALELCARKVAAASGDMRKALCICRSAIEMLEAEIRESIGLSEISLEERASPQQKIASDLDHVKGQEFDVVRIDHMALALSKTYKSPVVDTIQSLPHHQQIILCSSMKQFRGAKKDTILGELYKSYTGVCKSSLIPPAGILEFSNMCRVLNDQGLIKLGPSREDKLKRVTLNIDEADITFALKGIRFFRNCLQ 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1468 525 CDD Cdc6_C 428 510 IPR015163 -
Mibi05g1468 525 Pfam AAA lid domain 331 366 IPR041083 -
Mibi05g1468 525 FunFam Cell division control protein 427 517 - -
Mibi05g1468 525 SUPERFAMILY "Winged helix" DNA-binding domain 420 523 IPR036390 -
Mibi05g1468 525 Pfam CDC6, C terminal winged helix domain 435 513 IPR015163 -
Mibi05g1468 525 MobiDBLite consensus disorder prediction 19 98 - -
Mibi05g1468 525 MobiDBLite consensus disorder prediction 68 96 - -
Mibi05g1468 525 FunFam Cell division control protein 112 297 - -
Mibi05g1468 525 CDD AAA 137 298 - -
Mibi05g1468 525 Gene3D - 424 515 IPR036388 -
Mibi05g1468 525 Gene3D - 111 298 IPR027417 -
Mibi05g1468 525 FunFam Cell division control protein 298 424 - -
Mibi05g1468 525 Gene3D - 299 423 - -
Mibi05g1468 525 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 35 523 - -
Mibi05g1468 525 SMART Cdc6_C_2 435 514 IPR015163 -
Mibi05g1468 525 Pfam AAA domain 152 268 IPR003593 -
Mibi05g1468 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 374 IPR027417 -
Mibi05g1468 525 PIRSF Cdc6 6 525 IPR016314 GO:0006270|GO:0051301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1468 Mibi-ChrMibi05 17364015 17369160 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1468 1 524 Core DNA Replication Machinery Family AT2G29680 57.963 0.0 581