Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1465 ATGGAGGATTCATGGGAGAAAAGTGTTACGTACTCCCTAAACACCATCTTCCTCCTCTTCTCTGCCTACCTCGTCTTCGTCATGCAAATAGGCTTCGCCATGCTCTGTGCCGGCTCCGTCAGAGCCAAAAACGCCGTCAACATTATGCTCACTAATGTTGTAGACGCCGTCGTCGGAAGCATCTCTTTCTACCTCTTCGGCTTCGCATTTGCCTTCGGCGACGGTTCCAATTCCAACCCTTTCATTGGCACCGATCTATTTGCTCTCTATAGCATCCCAAATGGCACCTACGATTACAGTTTCTATCTTTACCAATGGGCTTTTGCTATAGCTGTTGCGGGCATTACAAGTGGGTCTATTGCTGAGAGAACCCAATTCAGTGCTTATCTTGTTTTTAGTTTTTTCCTTGCGGGCTTTGTGTACCCGGTTGTGGCCCATTGGGTCTGGTCTTCCGATGGTTGGCTTAGTACTGCTTCGAGTAATCTGTTTCTGGGCTCAGGTGCGATTGACTTTGCTGGGAGTGGGGTGGTTCATATGGTGGGCGCGATAGCGGGCTTATGGGGTTCGCTCATATTGGGCCCACGGGTTGGCCGGTTTGATGCTTTTGGAAATCCAGTGCCACTTCGAGGCCACAATGCGAGCCTAGTGGTACTTGGAACGTTTCTCTTGTGGTTTGGATGGTTTGGGTTTAATCCCGGCTCGTTTGATAAGATTTTTGTGCCGTATCCCGACACGTCGAATGAGGGTAATTGGACCTCCATCGGTCGGACCGCGGTCGTGACCACCTTAGCAGGATCGACGTCAGGAATCATCACCTTGTTCGGCCGGAGATTGATAATCGGTCATTGGGATGCAATTGATGTTTGCAATGGGTTGCTTGGTGGGTTTGTCGCAATCACCTCGGGTTGCTCCGTTGTCGAGCCATGGGCCGCAATTATTTGTGGGTTTGTCTCAGCTTGGGTCTTGATTGGGCTCAATATATTGGCCCTAAAACTGAAGTATGATGACCCGTTAGAGGCAGCCCAATTGCATGGTGGGTGTGGGGCTTGGGGTTTGATATTCACAGGTTTGTTTGCCAAAGAGGAGTTTGTGATTCAAGTCTGCGATCAAGGAGTGACTGGGGTGTCTAGGCCCTATGGGCTTTTATTAGGAGGTGGATGGGCCTTGATTGGAGCCCAAGTTGTTGAATTGTTAGCTATATTGGGTTGGGTTAGTGTAACCATGGGCCCTATGTTCTATGCCTTGCACAAGCTTAACCTACTGAGAATCTCAAGGACCGATGAACTTACAGGCCTTGATATTTCAACCCATGGCGGAACTGCTTACTCTCATCACGACGACAGCTTTCCTCGATCCTACGCAGATTATATGCGCCTTAGAGATGCTCAAACGTGA 1395 0.4946 MEDSWEKSVTYSLNTIFLLFSAYLVFVMQIGFAMLCAGSVRAKNAVNIMLTNVVDAVVGSISFYLFGFAFAFGDGSNSNPFIGTDLFALYSIPNGTYDYSFYLYQWAFAIAVAGITSGSIAERTQFSAYLVFSFFLAGFVYPVVAHWVWSSDGWLSTASSNLFLGSGAIDFAGSGVVHMVGAIAGLWGSLILGPRVGRFDAFGNPVPLRGHNASLVVLGTFLLWFGWFGFNPGSFDKIFVPYPDTSNEGNWTSIGRTAVVTTLAGSTSGIITLFGRRLIIGHWDAIDVCNGLLGGFVAITSGCSVVEPWAAIICGFVSAWVLIGLNILALKLKYDDPLEAAQLHGGCGAWGLIFTGLFAKEEFVIQVCDQGVTGVSRPYGLLLGGGWALIGAQVVELLAILGWVSVTMGPMFYALHKLNLLRISRTDELTGLDISTHGGTAYSHHDDSFPRSYADYMRLRDAQT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1465 464 FunFam Ammonium transporter 1 455 - -
Mibi05g1465 464 Pfam Ammonium Transporter Family 17 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mibi05g1465 464 TIGRFAM amt: ammonium transporter 14 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mibi05g1465 464 ProSitePatterns Ammonium transporters signature. 170 195 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mibi05g1465 464 PANTHER AMMONIUM TRANSPORTER 11 438 - -
Mibi05g1465 464 Gene3D Ammonium transporter AmtB like domains 2 456 IPR029020 -
Mibi05g1465 464 SUPERFAMILY Ammonium transporter 11 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1465 Mibi-ChrMibi05 17348859 17350253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1465 9 447 Inorganic Solute Cotransporters AT1G64780 67.489 0.0 599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1465 05 17348859 17350253 Mibi05g1465 05 17348859 17350253 ECH