Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1461 ATGGAAGATGATATAGAGAAGAAAGGAGAGGGAAGTGGGGAGAAGAAGAATGTGATGATGAAGTCATCAGAGATAGAGGGAGAGAATAGTAATTATGGAATGATGATGAGGGGTCAAGTGTTGAGGAAAATAATGAGCAACTTGCAAGAAGTCATCTTTGGTACTAAGCTTGCAGTGCTTTTTCCTGCCATCCCCCTTGCTGTTGCTGCTGATACCTATCAGTTTGGACGAGCATGGATATTTGCTTTGAGCTTACTTGGGCTGGCCCCTCTAGCTGAACGTGTCAGCTTTCTCACTGAACAAATCGCATATTTCACTGGCCCAACAGTTGGAGGGCTACTGAATGCAACATGTGGGAATGCAACTGAGATGATAATAGCACTATTGGCACTTCACAAGAACAAAATAAATGTTGTAAAGTTCTCTCTTTTGGGTTCCATTCTCTCAAACCTCCTCTTAGTTCTTGGCTCTTCACTTCTCTGTGGAGGCCTTGCCAACCTGAAGAAAGAACAGAGATATGACAGAAAACAGGCAGATGTAAATTCACTCCTTTTGCTTTTGGGGTTGCTTTGCCATTTGCTGCCATTGATCTTCAAGTATGCCCTCACAGGGGACCATTATTACCCTATAGACACTAGTACTCTTCAATTGTCAAGAGCAAGTAGTATTGTTATGCTTCTTGCTTATGCTGCTTATATCTTCTTCCAACTGAAAACTCACAGACAGTTATTTGACTCACAAGAGGAAGATGGAGAAGAAGAGAAGGCTGTGATAGGATTTGGGTTAGCATTTACATGGTTGGTGGGCATGACACTACTCATATCTTTGCTTTCTGAATATGTTGTGGGAACTATTGAGGCTGCTTCAGAATCTTGGGGTATTTCTGTAAGCTTCATTAGCATAATTTTGCTCCCTATTGTGGGGAATGCTGCAGAGCATGCTGGCTCAATCATATTTGCTTTTAAGAACAAGCTGGATTTATCTCTAGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGCGTGATTGTTGCATGGATAATGGGTGTAAAAATGGACTTAGATTTTAATCTCCTAGAAACTGGGTGTCTTGCTTTGACAATACTAGTAACAGCTTTCGCTTTACAGGATGGAACTTCACACTATATGAAAGGAGTGGTGCTTTTCCTGTGTTACATTGTCATTGCTGCATGCTTTTTCGTTCATAAAGCTCCATTATCCGATCAAATTCCTGGGGATAGTGTTAAATTTAAACCATCTTTGGATACCATGGCCACTTGA 1299 0.4111 MEDDIEKKGEGSGEKKNVMMKSSEIEGENSNYGMMMRGQVLRKIMSNLQEVIFGTKLAVLFPAIPLAVAADTYQFGRAWIFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIALLALHKNKINVVKFSLLGSILSNLLLVLGSSLLCGGLANLKKEQRYDRKQADVNSLLLLLGLLCHLLPLIFKYALTGDHYYPIDTSTLQLSRASSIVMLLAYAAYIFFQLKTHRQLFDSQEEDGEEEKAVIGFGLAFTWLVGMTLLISLLSEYVVGTIEAASESWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDLSLGVAMGSATQISMFVVPLSVIVAWIMGVKMDLDFNLLETGCLALTILVTAFALQDGTSHYMKGVVLFLCYIVIAACFFVHKAPLSDQIPGDSVKFKPSLDTMAT 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1461 432 FunFam Vacuolar cation/proton exchanger 108 252 - -
Mibi05g1461 432 Gene3D - 259 407 IPR044880 -
Mibi05g1461 432 Gene3D - 108 258 IPR044880 -
Mibi05g1461 432 FunFam Vacuolar cation/proton exchanger 253 407 - -
Mibi05g1461 432 TIGRFAM caca2: calcium/proton exchanger 43 406 - -
Mibi05g1461 432 TIGRFAM cax: calcium/proton exchanger 62 406 IPR004798 GO:0006816|GO:0015369
Mibi05g1461 432 MobiDBLite consensus disorder prediction 1 21 - -
Mibi05g1461 432 Pfam Sodium/calcium exchanger protein 264 404 IPR004837 GO:0016020|GO:0055085
Mibi05g1461 432 Pfam Sodium/calcium exchanger protein 78 237 IPR004837 GO:0016020|GO:0055085
Mibi05g1461 432 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 36 411 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1461 Mibi-ChrMibi05 17301041 17304197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1461 41 414 Antiporters AT2G38170 68.241 4.35e-178 504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1461 05 17301041 17304197 Mibi05g1461 05 17301041 17304197 ECH