Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1437 ATGTCTTGCTCCATCGCCGTCCATACTTCTCCTTCCTCTTCTTTCTTCTGCAATACTGCCATGAACTCTGTTGTTGTTTCTCCTCCTTCTTCTCCTTCTCCTTCTTCTTCTCGCTTTAGGCTTTTGAAGCCTCCAATCGCTTTCCCCTGTATTCCTTCTCCTTCCTCTGCTTCCTCCTCCTCGCCCACGAACTCCATCTTGAAGAGGAAGAGGCCTACAAGGCTTGATATTCCTGTTGCCTCTTTTGCTTTTGGTGCTCCGGCGACGCAGTCTGCGGCGGTGAGGGATTCCTTGGAGGCTGAAGGAAATGGGTTTTCTGTTTTTTGTAAAAAGGGAAGGAGGGAGTTCATGGAGGACCGTTACTCGGCTACCGTTAATCTTCAAGGAAAACCAAAACAGGCTTTCTTTGGGATATTCGATGGGCATGGAGGAGCAAAAGCTGCAGAATTTGCTGCTCATAGCTTGGAACAGAATGTCATGAAAGAAGTAATCAGGAGGAGTAGTGACAAAGAAGAAGACATTGAAGAATCAGTGAAACATGGTTACTTGACCACAGATTCAGAGTTCCTAAAAGAAGATGTCCTAGGTGGTTCTTGCTGTGTAACTGCATTGATCAGAGATGGCAACCTCATTGTGTCCAATGTTGGTGATTGCCGTGCCGTCATATGCCGTGGTGGTAAAGCTGAGGCCCTCACTTCCGATCACCGGCCCTCGAGGGAAGACGAGAGGGACAGAATTCAAGCTCTGGGTGGCTATGTTGATCTATGCCATGGAGTTTGGAGAATCCAAGGATCTCTTGCAGTGTCTAGAGGAATCGGAGATAAACCCCTGAAGCAATGGGTGACAGCAGAACCTGAGACTAAAATTCTCAAAATTGAAGCTGGACATGAGTTTTTAATACTAGCTTCTGATGGATTGTGGGACAAGGTTAGTAATCAGGAAGCAGTGGACATTGCTCGTTCTTTTTGTGTGGAGAGTGATAAGGCACAGCCATTGTTGGCCTGTAAAAAGCTTGTAGAATTGTCAGCTTCAAGAGGCTCTCCTGATGATATAAGCGTTATGGTAATCAACTTGGCTGATTATATATGA 1089 0.461 MSCSIAVHTSPSSSFFCNTAMNSVVVSPPSSPSPSSSRFRLLKPPIAFPCIPSPSSASSSSPTNSILKRKRPTRLDIPVASFAFGAPATQSAAVRDSLEAEGNGFSVFCKKGRREFMEDRYSATVNLQGKPKQAFFGIFDGHGGAKAAEFAAHSLEQNVMKEVIRRSSDKEEDIEESVKHGYLTTDSEFLKEDVLGGSCCVTALIRDGNLIVSNVGDCRAVICRGGKAEALTSDHRPSREDERDRIQALGGYVDLCHGVWRIQGSLAVSRGIGDKPLKQWVTAEPETKILKIEAGHEFLILASDGLWDKVSNQEAVDIARSFCVESDKAQPLLACKKLVELSASRGSPDDISVMVINLADYI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1437 362 CDD PP2Cc 103 358 IPR001932 -
Mibi05g1437 362 SUPERFAMILY PP2C-like 104 359 IPR036457 -
Mibi05g1437 362 Pfam Protein phosphatase 2C 105 350 IPR001932 -
Mibi05g1437 362 FunFam probable protein phosphatase 2C 25 97 361 - -
Mibi05g1437 362 Gene3D - 104 361 IPR036457 -
Mibi05g1437 362 ProSiteProfiles PPM-type phosphatase domain profile. 104 358 IPR001932 -
Mibi05g1437 362 PANTHER PROTEIN PHOSPHATASE 2C 68 357 IPR015655 GO:0004722|GO:0006470
Mibi05g1437 362 ProSitePatterns PPM-type phosphatase domain signature. 135 143 IPR000222 GO:0043169
Mibi05g1437 362 SMART PP2C_SIG_2 112 358 IPR001932 -
Mibi05g1437 362 SMART PP2C_4 96 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1437 Mibi-ChrMibi05 17030612 17032204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1437 1 362 PP2C-type Phosphatase Gene Family AT2G30020 58.500 2.28e-150 428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1437 05 17030612 17032204 Mibi08g0659 08 12564389 12566321 CCT
Mibi05g1437 05 17030612 17032204 Mibi05g1437 05 17030612 17032204 ECH
Mibi05g1437 05 17030612 17032204 Mibi08g0659 08 12564389 12566321 ECH