Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1436 ATGGCTTCTTGGGTGAGAGGGAATTGTGTCGGTAAGGGATCGTTTGGCACAGTCAGTGTTGGCATCAACCGATCGGACGGTCAGATTTTCGCCGTGAAATCAGTAGATCTCAACATGAATTTTCCATCTCAGGTGAAGGCTTTAGAGAACGAAATTCAAATTCTCCATCAGCTTCCTCCGTCGCCTTACGTCGTAGAGTTCCTCGGCGACGACCTAACGACGCCGTATCGGAATCTCCACATGGAGTACATGCCTGGTGGCACAATTGCTGACCTGGCAAACCGGAATGCTGACGTGGACGATGAGCTGGTCAGGTACTACACATGGTGTATGGTAAACGCCCTTAGACATGTCCACTCAAACGGCGTCGTTCACTGCGACGTTAAGGGGAGGAATGTTCTGTTGGGTCAAAACGGCGTCGTTGCGAAGCTCGCCGATTTCGGATCGGCGGTTGAGATTCCAGGGGAGGATTCCACGGTGGGGATTATGCCACGTGGCAGCCCGCTGTGGATGGCGCCGGAGGTGATCCGTGGGGAGTATCAGGGGCCGGAATCAGACGTGTGGTCGTTGGGGTGTACGGTCATCGAGATGGTCACCGGGAAACCGGCGTGGGAGGATCACGGCGGCGAAACGCTGAGTCGGATCGGTTACTCGGACGAGTTACCAAAATTCCCGATTAAATTTTCAGAACTTGGGTGTGATTTCATCGAGAAGTGTTTGAGAAAGGAATATAAACAACGATGGAGCTGCGATCAGCTGTTGAATCATCCATTTTTGTCGTCTGTGTCTGCGAATAAACCGGTTGAGTTATCTCCTCGTTGCATTCTTGACTGGGATAGCTTAGAATTCGGCGGAGAAGATTATGAAGAAGAGGAAATCAGGTTCGATGTGAATGCTGAAATTTCAGCTAAGGGTAGGATCGGTAAATTGGCGACGACAATGAGGGTAAATTGGGAAACGGAAGATTGGGTGGCGGTGAGAGGGCCGACGTCAGACGCAGAAGCTACAGCAATGGGAAGAGTGGACGGTGGGGGTGGAATTTTGGAAGGAGGGGCAAATTGGGAATATCGTCATGTGATGGGGGTAGAAGAGGAAATGGAAGTGGGGACAAGTTGGGAATATTCGAATAATGGGAGGAGGGTAAATCCGGAAAAGTGGGAGGGGGATGATAAGAGGTGGTTGGGGTGGCGGTGTGATCACAGGGAAGGAAGTGGAAGGAGAAACTTAGCTGGTTGGATAATAAGCATTATTCACAGCTTGTGTTGTATTAAATTACTCAAGTCATGTTACTTGAATTTCTTACCATTAATAAATTCAACTCTGTTGTTTTCTCCAATTATTTATTTTCTACCAGTTTCCCTCGAACATTGA 1371 0.4909 MASWVRGNCVGKGSFGTVSVGINRSDGQIFAVKSVDLNMNFPSQVKALENEIQILHQLPPSPYVVEFLGDDLTTPYRNLHMEYMPGGTIADLANRNADVDDELVRYYTWCMVNALRHVHSNGVVHCDVKGRNVLLGQNGVVAKLADFGSAVEIPGEDSTVGIMPRGSPLWMAPEVIRGEYQGPESDVWSLGCTVIEMVTGKPAWEDHGGETLSRIGYSDELPKFPIKFSELGCDFIEKCLRKEYKQRWSCDQLLNHPFLSSVSANKPVELSPRCILDWDSLEFGGEDYEEEEIRFDVNAEISAKGRIGKLATTMRVNWETEDWVAVRGPTSDAEATAMGRVDGGGGILEGGANWEYRHVMGVEEEMEVGTSWEYSNNGRRVNPEKWEGDDKRWLGWRCDHREGSGRRNLAGWIISIIHSLCCIKLLKSCYLNFLPLINSTLLFSPIIYFLPVSLEH 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1436 456 SUPERFAMILY Protein kinase-like (PK-like) 4 274 IPR011009 -
Mibi05g1436 456 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mibi05g1436 456 FunFam Serine threonine protein kinase putative 2 311 - -
Mibi05g1436 456 CDD STKc_MAPKKK 3 259 - -
Mibi05g1436 456 SMART serkin_6 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1436 456 Pfam Protein kinase domain 7 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1436 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Mibi05g1436 456 ProSiteProfiles Protein kinase domain profile. 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1436 456 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 328 - -
Mibi05g1436 456 Gene3D Transferase(Phosphotransferase) domain 1 2 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1436 Mibi-ChrMibi05 17011286 17012656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1436 4 338 MAP Kinase Kinase Kinase AT1G07150 56.932 3.40e-128 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi05g1436 Pkinase 5.7e-57 CL0016