Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1423 ATGGACCGTCGCTGGCCCTGGAAGAAAAAATCATCAGATAAAACAGTGCTTGAGAAAGCTGCTGCTGCATTGGACTCTGCTGGTGCTGATGCTGGTGTTGGTTCTCAGGGTAGTCAGGATAATTACAAGAAGCCAAATTATGTGCAAATTTCTGTGGAGTCATATTCACATCTGTCTGGCTTGGAGGATCAAGTGAAGACGTTTGAGGAAAAAGTTCAGACACTGGAAGACGAGGTCAAAGAACTGAATGAAAAGCTGTCAGTAGCAAACTCAGAGATAACTACCAAGGAAAGCTTAGTAAAACAACATGCTAAAGTGGCTGAAGAAGCTGTCTCAGGCTGGGAAAAGGCAGAAGCAGAAGCTTTGGCGTTGAAGAATCATCTAGAATCTGTCACACTCTCGAAGCTCACTGCTGAGGATCGGGCTTCACATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAACACGAGCATAAAATACAGGAAGTTGCTCTTGCTAAAACCAGGCAATTAGATAAAATTAAGGGTGAGCTAGACGCCAAGATAGTTAACTTAGAACAGGAACTTCTTAGGTCTGCTGCTGAAAATGGGGCTCTTTCAAGGTCTTTACAGGAGCGCTCTAACATGATAATCAAAATTAGTGAAGAAAAGGCTCAGGCTGAAGCTGATATTGAACTTTTGAAGGGCAACATAGAATCTTGTGAAAGGGAAATCAATTCACTGAAGTATGAACTTCATGTTGTTTCTAAGGAGCTGGAAATTCGTAACGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAATAGGCAGCACACAGAGGGTGTTAAAAAAATTGCAAAGTTAGAGGCTGAATGCCAAAGATTACGAGGTCTGGTGAGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAAATGAAGCTGGAAGTTGAGAATCTTGGCCGAGACTTTGGAGAAACTCGATCTAGGAGGTCTTCTGTTAGACCTTCTAGTCCTCATTTGTCCCCATCACCCGATTTCTCCCTAGATAATATTCAGAAATTTCAGAAGGAGAATGAATTTCTTACAGAGCGTTTACTGACAATGGAAGAAGAAACAAAGATGTTGAAAGAAGCTTTGGCAAAACGTAACAGTGAATTGCAGGCCTCAAGGAGCATGTGTGCTAAAACTCTGAGCAAACTTCAAAGTTTGGAAGCAAAACTTCAGCCAGTTGACCAGCATAAAGGCTCTCCAAAATCCATCAGCCAGATAACCCATGAAAGTATTTATGGTCAAAATGCAAGCAATGCACCAAGCTCAACCTCCATGTCTGAAGATGGAAATGATGATGTTGGAAAATGTGCCGAGTCTTGGTCTACAACATCAGTCTCGGAACTATCCCAATCCCAAAAAGAAAAGAATACTGGGAAATCTAGCATATCTGAGGCCACTAATAATTTGGAACTGATGGATGACTTTCTGGAGGTGGAGAAGTTGGCTTGTCTATCAAATGGTTCCAATGGCTCTATTTCAATTTCTTCAAGCAATACAGCTGAAATTGTGATCAACCATGTATCAGAAGTTAGTACTTGCACTAATGGTTCCTCTGAAAAGCAAAGTGATTTGAATCCATTACCCAATCAAGTGTCTAATGGTGAGGTGTTGTCAGCCTCTGATCCCCAATCTGATGTTAATTATTTGCCACTGACGGAGCTTCGATCAAGAATTTTGAGGGTTCTTGAGTCCATGCCTGGCAATGCTGATACAGGAAATATCCTTGAAGATATTAAACATATTTTGGAAGAAGTACGTGATACTTCCAACAACCATTCTGTTGAATGTATACCCCAGGATGATCCTACATGTGATAGGCAGGTTAACCCAGACGATGTTGGCTCACATCCTGAAAAGGAAAGCATTTCTTCAAAGCAAACAACGGAACACATGCAGATGACCACAGATTTGGAAGCTGCAGTCTCTTGTATTCACGACTTTGTGCTATTCCTAGGTAGAGAAGCAATGTCAGTTCATGACATTTCTGCTGATGGAGGAGTGAAGCTAAAGATTGAGAAATTTTCTCACACCTTTAATAAAGTCTTTTGCAATGAAGCAACTTTACTGCAGTTTGTCTTTGATTTGTCAGATGTATTAGCTAAGGCAAGTGAATTCAGATTTAATGTCCTTGGCTACAAGGGTACAGAAGCTGAAACTAACAGTCCTGATTGCATTGACAAAATTGCTTTGCCAGAAAATAAGTTAGTTCAAAATAGCCCGTCAGGAGAAAGATATCCAAGTGGCTGTTCCAATATTCTTAATCCTTGTGCTGATCCTCAGGTACCTGATGATGGAAATTTGATCTCTACCTATGAATCAAATGGTACTTCACACCAATTCTCAGCGGATAAGTTTGAAGAATTGAAATTAGAGAAAGAGAAGACAGCAATGGATCTGGCAAGATGCACTGAGACTCTTGAATCGACCAAGTCTCAATTACAAGAGACTGAGCAGCTTTTGGCAGAAGTGAAATCACAATTAGCTTCTTCTCTAAGATCAAATAGCTTGTCTGAGACGCAGCTGAAATGTATGGCAGAGTCATACAGGACCCTTGAAACACGCGCCCAGGAGTTAGAAACTGAGCTGAATCTTCTGCGAGTTAGGACAGAAACTCTGGAGAGTGAACTTCAAGATGAAAAGAGGGACCATGAAGATGCTGTGGCCAAGTGCAAGGACCTAGAAGAGCAACTGCAAAGGTATGAGAGCTCAGCAGCTGATAATGACCTCAAGAATAAGCAGGAGAGAGACTTGGCAGCTGCGGCGGAAAAGCTAGCGGAGTGTCAGGAAACAATATTTCTTCTTGGCAAGCAGCTACAAACTCTACGCCCTCAAATGGAGCATGGTGGATCTCCTTACAGTGAGAGAAGTTCAAAGGTTGATGAAGGGCTTACAGAAGAAGAGCCTACTATTAGTAACCCAAATTTGCAAGACTTAGATGAGATGGACAGTGCTAGTTCAGCATTCGTGCAAAGATTGGGTCCAGAGTCCCCCTTGTATTTCTCCAACAACCTTTGTCCATCTGATAATGAAGCAAACCTTGCCACCATATCTCCAGCAAAGAATCCAAAACACAGGCCCACTAAATCAGCCTCCTCCTCTGTTTCTTCCATCCCCACGCCAGAGAAACTCGCGCATGCCCGAGGATTTAGTAGATTCTTTTCATCTAAAGGGAAACATGGACGCTAA 3243 0.4215 MDRRWPWKKKSSDKTVLEKAAAALDSAGADAGVGSQGSQDNYKKPNYVQISVESYSHLSGLEDQVKTFEEKVQTLEDEVKELNEKLSVANSEITTKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRASHLDGALKECMRQIRNLKEEHEHKIQEVALAKTRQLDKIKGELDAKIVNLEQELLRSAAENGALSRSLQERSNMIIKISEEKAQAEADIELLKGNIESCEREINSLKYELHVVSKELEIRNEEKNMSMRSAEAANRQHTEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDFGETRSRRSSVRPSSPHLSPSPDFSLDNIQKFQKENEFLTERLLTMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAKLQPVDQHKGSPKSISQITHESIYGQNASNAPSSTSMSEDGNDDVGKCAESWSTTSVSELSQSQKEKNTGKSSISEATNNLELMDDFLEVEKLACLSNGSNGSISISSSNTAEIVINHVSEVSTCTNGSSEKQSDLNPLPNQVSNGEVLSASDPQSDVNYLPLTELRSRILRVLESMPGNADTGNILEDIKHILEEVRDTSNNHSVECIPQDDPTCDRQVNPDDVGSHPEKESISSKQTTEHMQMTTDLEAAVSCIHDFVLFLGREAMSVHDISADGGVKLKIEKFSHTFNKVFCNEATLLQFVFDLSDVLAKASEFRFNVLGYKGTEAETNSPDCIDKIALPENKLVQNSPSGERYPSGCSNILNPCADPQVPDDGNLISTYESNGTSHQFSADKFEELKLEKEKTAMDLARCTETLESTKSQLQETEQLLAEVKSQLASSLRSNSLSETQLKCMAESYRTLETRAQELETELNLLRVRTETLESELQDEKRDHEDAVAKCKDLEEQLQRYESSAADNDLKNKQERDLAAAAEKLAECQETIFLLGKQLQTLRPQMEHGGSPYSERSSKVDEGLTEEEPTISNPNLQDLDEMDSASSAFVQRLGPESPLYFSNNLCPSDNEANLATISPAKNPKHRPTKSASSSVSSIPTPEKLAHARGFSRFFSSKGKHGR 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1423 1080 MobiDBLite consensus disorder prediction 323 350 - -
Mibi05g1423 1080 Coils Coil 142 176 - -
Mibi05g1423 1080 MobiDBLite consensus disorder prediction 532 561 - -
Mibi05g1423 1080 MobiDBLite consensus disorder prediction 433 481 - -
Mibi05g1423 1080 Coils Coil 182 202 - -
Mibi05g1423 1080 MobiDBLite consensus disorder prediction 455 481 - -
Mibi05g1423 1080 MobiDBLite consensus disorder prediction 433 448 - -
Mibi05g1423 1080 Coils Coil 818 852 - -
Mibi05g1423 1080 MobiDBLite consensus disorder prediction 624 644 - -
Mibi05g1423 1080 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1075 - -
Mibi05g1423 1080 Coils Coil 217 293 - -
Mibi05g1423 1080 Pfam Filament-like plant protein, long coiled-coil 96 965 IPR008587 -
Mibi05g1423 1080 Coils Coil 353 380 - -
Mibi05g1423 1080 Coils Coil 58 99 - -
Mibi05g1423 1080 MobiDBLite consensus disorder prediction 1029 1058 - -
Mibi05g1423 1080 MobiDBLite consensus disorder prediction 611 646 - -
Mibi05g1423 1080 MobiDBLite consensus disorder prediction 963 997 - -
Mibi05g1423 1080 Coils Coil 860 949 - -
Mibi05g1423 1080 MobiDBLite consensus disorder prediction 332 350 - -
Mibi05g1423 1080 MobiDBLite consensus disorder prediction 1029 1060 - -
Mibi05g1423 1080 SUPERFAMILY Tropomyosin 804 962 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1423 Mibi-ChrMibi05 16851498 16855787 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2595 08 43724900 43730047 Mibi05g1423 05 16851498 16855787 CCT
Mibi05g1423 05 16851498 16855787 Mibi05g1423 05 16851498 16855787 ECH