LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi05g1389	ATGAGAGTGTGGTGGCCATATTGGTGGAACAACACAGTGATGCGTTTGGTGGTGATTTTGTTATGTGCTTTCTGCTGGGAAACCAAAGCACTTTTCAAACTGCCACCGAATACGACGGCTCCACCGGCGGTTATAGCTTTTGGAGATTCAATATTGGACACCGGAAATAACAATGGAATTAAAACTCTCGTCAAGGCTAATTTTCCTCCTTATGGTAAAGACTTTCAGGGAGGTGTTCCCACCGGCCGATTTTGCAATGGCAAGGTCCCTTCTGACCTATTAGTTGAAGAACTAGGGATTAAAGAGTATTTGCCTGCATATTTGGATCCAAACCTCAAGCCTAGCGATCTTCCAACTGGGGTCTGCTTTGCCTCTGGTGCTTCCGGCTATGATCCTTTGACACCCAAAGCAGTGTCAGTGATACCAATGGCGGAACAAGTAGAGATGTTCAAGGAATACATAGAGAGGCTGAAGGGAATAGTGGGAGAGGAAAGAGCAAAGGAGATAGTGGGAAATAGTCTTTATGCGGTGGTAGCAGGAAGCGACGACATAGCCAATACTTACTTCATATTAAGAGTCAGACAACTTCAATATGACATTCCTTCTTACACTGATCTTATGGTTAACGGAGCCTCTGATTTCTTGAAGCAAATATATGAGCTTGGGGCAAGGAGGATCGCAGTGCTGGGTGCACCACCAATCGGATGTGTGCCGTCACAAAGAACTCTGGCTGGTGGCATTGTTAGAGAATGTGCTGATAAGTACAACGAAGCTGCCAAGTTATTTAACTCCAAACTCTCCAGGCAGATTGATTCTCTCAGTCGCACTATGCCTAATTCCAGACTCGTTTACGTTAATGTCTACGACTCTCTCCTTGATATCATCCTCAACTACCAAAATTACGGATATAAAGTTGTGGACAAGGGTTGTTGTGGTACTGGTAATATTGAAGTTGCCGTGTTGTGCAATCGTTTGGCTCCCACGTGTCCCGATGTCTCCAACTATGTGTTTTGGGATAGTTATCATCCTACAGAAGGAGTCTACAAAATACTGATTAATCGAGTTCTTCAAACATATCTCCCTCGTCTCCTTGCTTAA	1098	0.4435	MRVWWPYWWNNTVMRLVVILLCAFCWETKALFKLPPNTTAPPAVIAFGDSILDTGNNNGIKTLVKANFPPYGKDFQGGVPTGRFCNGKVPSDLLVEELGIKEYLPAYLDPNLKPSDLPTGVCFASGASGYDPLTPKAVSVIPMAEQVEMFKEYIERLKGIVGEERAKEIVGNSLYAVVAGSDDIANTYFILRVRQLQYDIPSYTDLMVNGASDFLKQIYELGARRIAVLGAPPIGCVPSQRTLAGGIVRECADKYNEAAKLFNSKLSRQIDSLSRTMPNSRLVYVNVYDSLLDIILNYQNYGYKVVDKGCCGTGNIEVAVLCNRLAPTCPDVSNYVFWDSYHPTEGVYKILINRVLQTYLPRLLA	365

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi05g1389	365	FunFam	GDSL esterase/lipase APG	33	360	-	-
	Mibi05g1389	365	Pfam	GDSL-like Lipase/Acylhydrolase	44	354	IPR001087	GO:0016788
	Mibi05g1389	365	Gene3D	SGNH hydrolase	37	360	IPR036514	-
	Mibi05g1389	365	PANTHER	GDSL ESTERASE/LIPASE EXL3	23	355	-	-
	Mibi05g1389	365	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	44	55	IPR008265	GO:0006629\|GO:0016298
	Mibi05g1389	365	CDD	SGNH_plant_lipase_like	42	359	IPR035669	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi05g1389	Mibi-ChrMibi05	16471260	16474102	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi05g1389	16	357	Pollen Coat Proteome	AT1G75910	39.710	1.52e-79	245